Protein–RNA interactions for Protein: P38863

SPC97, Spindle pole body component SPC97, yeastyeast

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC97P38863 LAA1YJL207C 6045 nt1.35□□□□□ -2.19
SPC97P38863 CDC25YLR310C 4770 nt1.35□□□□□ -2.19
SPC97P38863 TAH1YCR060W 336 nt1.35□□□□□ -2.19
SPC97P38863 YNL067W-BYNL067W-B 141 nt1.35□□□□□ -2.19
SPC97P38863 STO1YMR125W 2586 nt1.35□□□□□ -2.19
SPC97P38863 SET3YKR029C 2256 nt1.35□□□□□ -2.19
SPC97P38863 EST2YLR318W 2655 nt1.34□□□□□ -2.19
SPC97P38863 COG6YNL041C 2520 nt1.34□□□□□ -2.19
SPC97P38863 SOM1YEL059C-A 225 nt1.34□□□□□ -2.19
SPC97P38863 NUP188YML103C 4968 nt1.34□□□□□ -2.2
SPC97P38863 MSH3YCR092C 3057 nt1.33□□□□□ -2.2
SPC97P38863 YHR217CYHR217C 462 nt1.33□□□□□ -2.2
SPC97P38863 MMS4YBR098W 2076 nt1.31□□□□□ -2.2
SPC97P38863 UTP8YGR128C 2142 nt1.31□□□□□ -2.2
SPC97P38863 CDC39YCR093W 6327 nt1.31□□□□□ -2.2
SPC97P38863 snR61snR61 90 nt1.31□□□□□ -2.2
SPC97P38863 COX5BYIL111W 456 nt1.31□□□□□ -2.2
SPC97P38863 YLL020CYLL020C 306 nt1.31□□□□□ -2.2
SPC97P38863 MSN5YDR335W 3675 nt1.3□□□□□ -2.2
SPC97P38863 YGR130CYGR130C 2451 nt1.3□□□□□ -2.2
SPC97P38863 PAN2YGL094C 3348 nt1.3□□□□□ -2.2
SPC97P38863 SEC21YNL287W 2808 nt1.3□□□□□ -2.2
SPC97P38863 RSM22YKL155C 1887 nt1.29□□□□□ -2.2
SPC97P38863 FYV10YIL097W 1551 nt1.29□□□□□ -2.2
SPC97P38863 AZF1YOR113W 2745 nt1.29□□□□□ -2.2
SPC97P38863 NOP9YJL010C 2001 nt1.28□□□□□ -2.2
SPC97P38863 SMC1YFL008W 3678 nt1.28□□□□□ -2.2
SPC97P38863 YGL041C-BYGL041C-B 183 nt1.27□□□□□ -2.21
SPC97P38863 APL3YBL037W 3078 nt1.27□□□□□ -2.21
SPC97P38863 YDR210WYDR210W 228 nt1.26□□□□□ -2.21
SPC97P38863 YLR041WYLR041W 321 nt1.26□□□□□ -2.21
SPC97P38863 SWI4YER111C 3282 nt1.26□□□□□ -2.21
SPC97P38863 YML002WYML002W 2214 nt1.25□□□□□ -2.21
SPC97P38863 WAR1YML076C 2835 nt1.25□□□□□ -2.21
SPC97P38863 tH(GUG)E1tH(GUG)E1 72 nt1.25□□□□□ -2.21
SPC97P38863 tH(GUG)E2tH(GUG)E2 72 nt1.25□□□□□ -2.21
SPC97P38863 tH(GUG)G1tH(GUG)G1 72 nt1.25□□□□□ -2.21
SPC97P38863 tH(GUG)G2tH(GUG)G2 72 nt1.25□□□□□ -2.21
SPC97P38863 tH(GUG)HtH(GUG)H 72 nt1.25□□□□□ -2.21
SPC97P38863 tH(GUG)KtH(GUG)K 72 nt1.25□□□□□ -2.21
SPC97P38863 tH(GUG)MtH(GUG)M 72 nt1.25□□□□□ -2.21
SPC97P38863 snR190snR190 190 nt1.25□□□□□ -2.21
SPC97P38863 NUP145YGL092W 3954 nt1.23□□□□□ -2.21
SPC97P38863 STF2YGR008C 255 nt1.22□□□□□ -2.21
SPC97P38863 HUG1YML058W-A 207 nt1.21□□□□□ -2.22
SPC97P38863 SEC1YDR164C 2175 nt1.21□□□□□ -2.22
SPC97P38863 tM(CAU)Q2tM(CAU)Q2 78 nt1.2□□□□□ -2.22
SPC97P38863 tV(UAC)BtV(UAC)B 74 nt1.2□□□□□ -2.22
SPC97P38863 tV(UAC)DtV(UAC)D 74 nt1.2□□□□□ -2.22
SPC97P38863 YKL100W-AYKL100W-A 90 nt1.2□□□□□ -2.22
SPC97P38863 YJR029WYJR029W 5268 nt1.19□□□□□ -2.22
SPC97P38863 YPR137C-BYPR137C-B 5268 nt1.19□□□□□ -2.22
SPC97P38863 tN(GUU)QtN(GUU)Q 71 nt1.19□□□□□ -2.22
SPC97P38863 YLR232WYLR232W 348 nt1.19□□□□□ -2.22
SPC97P38863 KAP120YPL125W 3099 nt1.19□□□□□ -2.22
SPC97P38863 RPL26BYGR034W 384 nt1.18□□□□□ -2.22
SPC97P38863 CLU1YMR012W 3834 nt1.18□□□□□ -2.22
SPC97P38863 RAD9YDR217C 3930 nt1.18□□□□□ -2.22
SPC97P38863 YDL247W-AYDL247W-A 75 nt1.17□□□□□ -2.22
SPC97P38863 IML1YJR138W 4755 nt1.17□□□□□ -2.22
SPC97P38863 SEC3YER008C 4011 nt1.16□□□□□ -2.22
SPC97P38863 snR81snR81 201 nt1.15□□□□□ -2.23
SPC97P38863 SBH1YER087C-B 249 nt1.15□□□□□ -2.23
SPC97P38863 YJL127W-AYJL127W-A 117 nt1.15□□□□□ -2.23
SPC97P38863 YBR200W-AYBR200W-A 165 nt1.15□□□□□ -2.23
SPC97P38863 tS(GCU)Q1tS(GCU)Q1 86 nt1.14□□□□□ -2.23
SPC97P38863 YDL073WYDL073W 2955 nt1.12□□□□□ -2.23
SPC97P38863 SPT7YBR081C 3999 nt1.12□□□□□ -2.23
SPC97P38863 BIR1YJR089W 2865 nt1.12□□□□□ -2.23
SPC97P38863 SIP4YJL089W 2490 nt1.11□□□□□ -2.23
SPC97P38863 YNL266WYNL266W 420 nt1.1□□□□□ -2.23
SPC97P38863 YIL142C-AYIL142C-A 333 nt1.09□□□□□ -2.23
SPC97P38863 YBR072C-AYBR072C-A 162 nt1.09□□□□□ -2.23
SPC97P38863 RKR1YMR247C 4689 nt1.09□□□□□ -2.24
SPC97P38863 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
SPC97P38863 NNF2YGR089W 2811 nt1.08□□□□□ -2.24
SPC97P38863 BEM2YER155C 6504 nt1.08□□□□□ -2.24
SPC97P38863 NST1YNL091W 3723 nt1.07□□□□□ -2.24
SPC97P38863 ROM2YLR371W 4071 nt1.07□□□□□ -2.24
SPC97P38863 YGR146C-AYGR146C-A 162 nt1.06□□□□□ -2.24
SPC97P38863 YPR160W-AYPR160W-A 81 nt1.06□□□□□ -2.24
SPC97P38863 snR45snR45 172 nt1.06□□□□□ -2.24
SPC97P38863 YLL066W-BYLL066W-B 171 nt1.04□□□□□ -2.24
SPC97P38863 YOL083C-AYOL083C-A 141 nt1.04□□□□□ -2.24
SPC97P38863 PRP16YKR086W 3216 nt1.04□□□□□ -2.24
SPC97P38863 UBP3YER151C 2739 nt1.04□□□□□ -2.24
SPC97P38863 YNL054W-BYNL054W-B 5250 nt1.03□□□□□ -2.24
SPC97P38863 SEC8YPR055W 3198 nt1.02□□□□□ -2.25
SPC97P38863 YBL071C-BYBL071C-B 99 nt1.02□□□□□ -2.25
SPC97P38863 YAL037C-AYAL037C-A 93 nt1□□□□□ -2.25
SPC97P38863 YLR399W-AYLR399W-A 105 nt0.99□□□□□ -2.25
SPC97P38863 YPR117WYPR117W 7470 nt0.99□□□□□ -2.25
SPC97P38863 SCC2YDR180W 4482 nt0.99□□□□□ -2.25
SPC97P38863 DOP1YDR141C 5097 nt0.97□□□□□ -2.25
SPC97P38863 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
SPC97P38863 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
SPC97P38863 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
SPC97P38863 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
SPC97P38863 EMT2tM(CAU)O2 73 nt0.97□□□□□ -2.25
SPC97P38863 BEM3YPL115C 3387 nt0.97□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 59 ms