Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHKAP35790 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHKAP35790 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.08■□□□□ 0.97
CHKAP35790 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHKAP35790 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHKAP35790 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHKAP35790 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHKAP35790 KRT18P29-201ENST00000397031 1267 ntBASIC21.08■□□□□ 0.97
CHKAP35790 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.08■□□□□ 0.97
CHKAP35790 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.08■□□□□ 0.97
CHKAP35790 AL356652.1-201ENST00000615962 565 ntBASIC21.08■□□□□ 0.97
CHKAP35790 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHKAP35790 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHKAP35790 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CHKAP35790 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.08■□□□□ 0.96
CHKAP35790 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHKAP35790 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.08■□□□□ 0.96
CHKAP35790 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.08■□□□□ 0.96
CHKAP35790 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.07■□□□□ 0.96
CHKAP35790 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHKAP35790 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.07■□□□□ 0.96
CHKAP35790 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHKAP35790 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHKAP35790 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CHKAP35790 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.07■□□□□ 0.96
CHKAP35790 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.07■□□□□ 0.96
CHKAP35790 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.07■□□□□ 0.96
CHKAP35790 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHKAP35790 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.07■□□□□ 0.96
CHKAP35790 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.07■□□□□ 0.96
CHKAP35790 C2orf69P4-201ENST00000565394 541 ntBASIC21.07■□□□□ 0.96
CHKAP35790 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHKAP35790 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.07■□□□□ 0.96
CHKAP35790 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHKAP35790 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHKAP35790 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHKAP35790 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.06■□□□□ 0.96
CHKAP35790 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.06■□□□□ 0.96
CHKAP35790 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CHKAP35790 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.06■□□□□ 0.96
CHKAP35790 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CHKAP35790 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.06■□□□□ 0.96
CHKAP35790 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CHKAP35790 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHKAP35790 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
CHKAP35790 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.05■□□□□ 0.96
CHKAP35790 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CHKAP35790 AC026366.1-201ENST00000488803 879 ntBASIC21.05■□□□□ 0.96
CHKAP35790 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.05■□□□□ 0.96
CHKAP35790 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.05■□□□□ 0.96
CHKAP35790 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.05■□□□□ 0.96
CHKAP35790 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.05■□□□□ 0.96
CHKAP35790 AC092368.3-202ENST00000574180 1591 ntBASIC21.05■□□□□ 0.96
CHKAP35790 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
CHKAP35790 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CHKAP35790 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHKAP35790 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.05■□□□□ 0.96
CHKAP35790 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHKAP35790 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHKAP35790 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHKAP35790 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHKAP35790 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.04■□□□□ 0.96
CHKAP35790 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.04■□□□□ 0.96
CHKAP35790 AP003097.1-201ENST00000530657 1135 ntBASIC21.04■□□□□ 0.96
CHKAP35790 PNMA6B-201ENST00000538162 1200 ntBASIC21.04■□□□□ 0.96
CHKAP35790 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHKAP35790 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.04■□□□□ 0.96
CHKAP35790 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.04■□□□□ 0.96
CHKAP35790 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHKAP35790 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHKAP35790 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CHKAP35790 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHKAP35790 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.04■□□□□ 0.96
CHKAP35790 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
CHKAP35790 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms