Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
KRT9P35527 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT9P35527 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.82■■□□□ 1.08
KRT9P35527 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT9P35527 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.82■■□□□ 1.08
KRT9P35527 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT9P35527 AC011767.1-201ENST00000617410 1153 ntBASIC21.82■■□□□ 1.08
KRT9P35527 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
KRT9P35527 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT9P35527 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT9P35527 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.82■■□□□ 1.08
KRT9P35527 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.82■■□□□ 1.08
KRT9P35527 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.82■■□□□ 1.08
KRT9P35527 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT9P35527 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
KRT9P35527 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT9P35527 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT9P35527 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 AC098818.2-201ENST00000564925 2320 ntBASIC21.81■■□□□ 1.08
KRT9P35527 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
KRT9P35527 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.81■■□□□ 1.08
KRT9P35527 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.81■■□□□ 1.08
KRT9P35527 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.81■■□□□ 1.08
KRT9P35527 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
KRT9P35527 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
KRT9P35527 BID-214ENST00000617586 542 ntTSL 5 BASIC21.81■■□□□ 1.08
KRT9P35527 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.81■■□□□ 1.08
KRT9P35527 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT9P35527 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.81■■□□□ 1.08
KRT9P35527 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.8■■□□□ 1.08
KRT9P35527 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.8■■□□□ 1.08
KRT9P35527 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.8■■□□□ 1.08
KRT9P35527 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
KRT9P35527 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
KRT9P35527 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.8■■□□□ 1.08
KRT9P35527 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
KRT9P35527 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.8■■□□□ 1.08
KRT9P35527 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.8■■□□□ 1.08
KRT9P35527 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT9P35527 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.8■■□□□ 1.08
KRT9P35527 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.8■■□□□ 1.08
KRT9P35527 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.8■■□□□ 1.08
KRT9P35527 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT9P35527 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT9P35527 BX323043.1-201ENST00000641006 1765 ntBASIC21.79■■□□□ 1.08
KRT9P35527 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT9P35527 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT9P35527 AL020996.1-203ENST00000536896 2307 ntBASIC21.79■■□□□ 1.08
KRT9P35527 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
KRT9P35527 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KRT9P35527 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.79■■□□□ 1.08
KRT9P35527 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.79■■□□□ 1.08
KRT9P35527 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.79■■□□□ 1.08
KRT9P35527 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.79■■□□□ 1.08
KRT9P35527 AC007322.4-201ENST00000509611 723 ntBASIC21.79■■□□□ 1.08
KRT9P35527 DUX4L16-201ENST00000555130 1264 ntBASIC21.79■■□□□ 1.08
KRT9P35527 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.79■■□□□ 1.08
KRT9P35527 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.79■■□□□ 1.08
KRT9P35527 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.79■■□□□ 1.08
KRT9P35527 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.79■■□□□ 1.08
KRT9P35527 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.79■■□□□ 1.08
KRT9P35527 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
KRT9P35527 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
KRT9P35527 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.79■■□□□ 1.08
KRT9P35527 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.79■■□□□ 1.08
KRT9P35527 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT9P35527 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT9P35527 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.79■■□□□ 1.08
KRT9P35527 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT9P35527 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.79■■□□□ 1.08
KRT9P35527 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT9P35527 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
KRT9P35527 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KRT9P35527 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
KRT9P35527 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.78■■□□□ 1.08
KRT9P35527 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KRT9P35527 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.78■■□□□ 1.08
KRT9P35527 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT9P35527 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT9P35527 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms