Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTPN7P35236 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPN7P35236 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPN7P35236 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
PTPN7P35236 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTPN7P35236 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN7P35236 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN7P35236 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN7P35236 AL512625.2-201ENST00000417533 625 ntBASIC20.67■□□□□ 0.9
PTPN7P35236 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.67■□□□□ 0.9
PTPN7P35236 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.67■□□□□ 0.9
PTPN7P35236 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPN7P35236 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN7P35236 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.67■□□□□ 0.9
PTPN7P35236 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN7P35236 AC010980.2-201ENST00000587099 1412 ntBASIC20.67■□□□□ 0.9
PTPN7P35236 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.67■□□□□ 0.9
PTPN7P35236 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.67■□□□□ 0.9
PTPN7P35236 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN7P35236 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN7P35236 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTPN7P35236 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN7P35236 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN7P35236 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN7P35236 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PTPN7P35236 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN7P35236 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN7P35236 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPN7P35236 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN7P35236 AC023632.3-201ENST00000521633 145 ntBASIC20.66■□□□□ 0.9
PTPN7P35236 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPN7P35236 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPN7P35236 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPN7P35236 AL589743.5-201ENST00000616611 1050 ntBASIC20.66■□□□□ 0.9
PTPN7P35236 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.66■□□□□ 0.9
PTPN7P35236 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN7P35236 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PTPN7P35236 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPN7P35236 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPN7P35236 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPN7P35236 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN7P35236 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN7P35236 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PTPN7P35236 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.65■□□□□ 0.9
PTPN7P35236 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN7P35236 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PTPN7P35236 AP001271.2-201ENST00000624018 1556 ntBASIC20.65■□□□□ 0.9
PTPN7P35236 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN7P35236 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN7P35236 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN7P35236 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PTPN7P35236 AL355472.2-201ENST00000422958 438 ntBASIC20.65■□□□□ 0.9
PTPN7P35236 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN7P35236 C2orf69P4-201ENST00000565394 541 ntBASIC20.65■□□□□ 0.9
PTPN7P35236 MIR5787-201ENST00000611784 55 ntBASIC20.65■□□□□ 0.9
PTPN7P35236 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN7P35236 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN7P35236 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN7P35236 AC116562.4-201ENST00000641316 2276 ntBASIC20.65■□□□□ 0.9
PTPN7P35236 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPN7P35236 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN7P35236 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN7P35236 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.64■□□□□ 0.9
PTPN7P35236 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN7P35236 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN7P35236 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN7P35236 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN7P35236 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN7P35236 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PTPN7P35236 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.64■□□□□ 0.89
PTPN7P35236 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN7P35236 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.64■□□□□ 0.89
PTPN7P35236 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PTPN7P35236 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN7P35236 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN7P35236 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN7P35236 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN7P35236 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTPN7P35236 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PTPN7P35236 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN7P35236 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN7P35236 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTPN7P35236 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN7P35236 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN7P35236 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN7P35236 HLA-G-202ENST00000376815 851 ntBASIC20.63■□□□□ 0.89
PTPN7P35236 HLA-G-203ENST00000376818 1127 ntBASIC20.63■□□□□ 0.89
PTPN7P35236 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN7P35236 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PTPN7P35236 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN7P35236 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN7P35236 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN7P35236 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN7P35236 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN7P35236 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms