Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 KRT16P1-201ENST00000399124 1418 ntBASIC21.96■■□□□ 1.11
HOXC8P31273 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.96■■□□□ 1.11
HOXC8P31273 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC8P31273 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.95■■□□□ 1.11
HOXC8P31273 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
HOXC8P31273 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC8P31273 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.95■■□□□ 1.1
HOXC8P31273 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.95■■□□□ 1.1
HOXC8P31273 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC8P31273 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.95■■□□□ 1.1
HOXC8P31273 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.95■■□□□ 1.1
HOXC8P31273 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC8P31273 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
HOXC8P31273 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HOXC8P31273 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC8P31273 AC079834.2-201ENST00000609776 1949 ntBASIC21.94■■□□□ 1.1
HOXC8P31273 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
HOXC8P31273 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HOXC8P31273 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HOXC8P31273 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
HOXC8P31273 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HOXC8P31273 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.94■■□□□ 1.1
HOXC8P31273 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.94■■□□□ 1.1
HOXC8P31273 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.94■■□□□ 1.1
HOXC8P31273 FITM1-202ENST00000559294 800 ntBASIC21.94■■□□□ 1.1
HOXC8P31273 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.94■■□□□ 1.1
HOXC8P31273 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.94■■□□□ 1.1
HOXC8P31273 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.94■■□□□ 1.1
HOXC8P31273 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HOXC8P31273 TFP1-202ENST00000475455 1573 ntBASIC21.94■■□□□ 1.1
HOXC8P31273 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
HOXC8P31273 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HOXC8P31273 DPP3P2-201ENST00000416030 1696 ntBASIC21.94■■□□□ 1.1
HOXC8P31273 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.94■■□□□ 1.1
HOXC8P31273 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.94■■□□□ 1.1
HOXC8P31273 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HOXC8P31273 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HOXC8P31273 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HOXC8P31273 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HOXC8P31273 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HOXC8P31273 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.93■■□□□ 1.1
HOXC8P31273 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.93■■□□□ 1.1
HOXC8P31273 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.93■■□□□ 1.1
HOXC8P31273 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
HOXC8P31273 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.93■■□□□ 1.1
HOXC8P31273 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.93■■□□□ 1.1
HOXC8P31273 AC007225.1-201ENST00000566331 1836 ntBASIC21.93■■□□□ 1.1
HOXC8P31273 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.93■■□□□ 1.1
HOXC8P31273 CR392000.1-201ENST00000624770 1228 ntBASIC21.93■■□□□ 1.1
HOXC8P31273 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC8P31273 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.92■■□□□ 1.1
HOXC8P31273 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.92■■□□□ 1.1
HOXC8P31273 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.92■■□□□ 1.1
HOXC8P31273 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC8P31273 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC8P31273 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.92■■□□□ 1.1
HOXC8P31273 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC8P31273 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC8P31273 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC8P31273 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
HOXC8P31273 MESTP1-201ENST00000404287 994 ntBASIC21.92■■□□□ 1.1
HOXC8P31273 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC8P31273 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.92■■□□□ 1.1
HOXC8P31273 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.92■■□□□ 1.1
HOXC8P31273 MIR6786-201ENST00000616843 113 ntBASIC21.92■■□□□ 1.1
HOXC8P31273 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.92■■□□□ 1.1
HOXC8P31273 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC8P31273 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HOXC8P31273 AP006587.1-201ENST00000534129 1502 ntBASIC21.91■■□□□ 1.1
HOXC8P31273 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC8P31273 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC8P31273 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC8P31273 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HOXC8P31273 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC8P31273 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.91■■□□□ 1.1
HOXC8P31273 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.91■■□□□ 1.1
HOXC8P31273 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.91■■□□□ 1.1
HOXC8P31273 AL445675.2-201ENST00000620291 557 ntBASIC21.91■■□□□ 1.1
HOXC8P31273 AC026310.3-201ENST00000625186 2373 ntBASIC21.91■■□□□ 1.1
HOXC8P31273 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.91■■□□□ 1.1
HOXC8P31273 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC8P31273 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC8P31273 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HOXC8P31273 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
HOXC8P31273 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC8P31273 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.9■■□□□ 1.1
HOXC8P31273 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC8P31273 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
HOXC8P31273 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC8P31273 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC8P31273 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.9■■□□□ 1.1
HOXC8P31273 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
HOXC8P31273 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.9■■□□□ 1.1
HOXC8P31273 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
HOXC8P31273 AC026271.3-201ENST00000571884 352 ntBASIC21.9■■□□□ 1.1
HOXC8P31273 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.9■■□□□ 1.1
HOXC8P31273 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.9■■□□□ 1.1
HOXC8P31273 RN7SL850P-201ENST00000579959 291 ntBASIC21.9■■□□□ 1.1
HOXC8P31273 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.9■■□□□ 1.1
HOXC8P31273 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms