Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACANP16112 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACANP16112 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.48■□□□□ 0.23
ACANP16112 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACANP16112 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.47■□□□□ 0.23
ACANP16112 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACANP16112 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ACANP16112 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACANP16112 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ACANP16112 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.47■□□□□ 0.23
ACANP16112 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACANP16112 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.47■□□□□ 0.23
ACANP16112 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.47■□□□□ 0.23
ACANP16112 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.47■□□□□ 0.23
ACANP16112 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ACANP16112 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.47■□□□□ 0.23
ACANP16112 PTBP1P-201ENST00000554374 1601 ntBASIC16.47■□□□□ 0.23
ACANP16112 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACANP16112 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.47■□□□□ 0.23
ACANP16112 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACANP16112 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACANP16112 COX11P1-201ENST00000489116 835 ntBASIC16.47■□□□□ 0.23
ACANP16112 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.47■□□□□ 0.23
ACANP16112 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.47■□□□□ 0.23
ACANP16112 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.47■□□□□ 0.23
ACANP16112 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ACANP16112 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ACANP16112 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACANP16112 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.46■□□□□ 0.23
ACANP16112 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ACANP16112 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.46■□□□□ 0.23
ACANP16112 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACANP16112 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.46■□□□□ 0.23
ACANP16112 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.46■□□□□ 0.23
ACANP16112 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ACANP16112 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
ACANP16112 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACANP16112 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ACANP16112 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.46■□□□□ 0.23
ACANP16112 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.46■□□□□ 0.23
ACANP16112 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ACANP16112 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.45■□□□□ 0.22
ACANP16112 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.45■□□□□ 0.22
ACANP16112 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.45■□□□□ 0.22
ACANP16112 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.45■□□□□ 0.22
ACANP16112 AC128688.1-201ENST00000487626 519 ntBASIC16.45■□□□□ 0.22
ACANP16112 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ACANP16112 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ACANP16112 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.45■□□□□ 0.22
ACANP16112 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
ACANP16112 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.44■□□□□ 0.22
ACANP16112 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ACANP16112 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.44■□□□□ 0.22
ACANP16112 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ACANP16112 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.44■□□□□ 0.22
ACANP16112 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.44■□□□□ 0.22
ACANP16112 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 IER3-202ENST00000376377 1350 ntBASIC16.44■□□□□ 0.22
ACANP16112 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ACANP16112 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.44■□□□□ 0.22
ACANP16112 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
ACANP16112 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.44■□□□□ 0.22
ACANP16112 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
ACANP16112 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.44■□□□□ 0.22
ACANP16112 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
ACANP16112 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ACANP16112 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ACANP16112 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ACANP16112 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ACANP16112 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ACANP16112 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.43■□□□□ 0.22
ACANP16112 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.43■□□□□ 0.22
ACANP16112 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ACANP16112 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.43■□□□□ 0.22
ACANP16112 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms