Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL6A2P12110 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL6A2P12110 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.72■□□□□ 0.75
COL6A2P12110 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.72■□□□□ 0.75
COL6A2P12110 RARRES2P4-201ENST00000514074 484 ntBASIC19.72■□□□□ 0.75
COL6A2P12110 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.72■□□□□ 0.75
COL6A2P12110 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.72■□□□□ 0.75
COL6A2P12110 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.72■□□□□ 0.75
COL6A2P12110 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
COL6A2P12110 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
COL6A2P12110 AL031963.3-201ENST00000606441 850 ntBASIC19.72■□□□□ 0.75
COL6A2P12110 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.72■□□□□ 0.75
COL6A2P12110 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
COL6A2P12110 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL6A2P12110 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL6A2P12110 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL6A2P12110 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL6A2P12110 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.71■□□□□ 0.75
COL6A2P12110 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
COL6A2P12110 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.71■□□□□ 0.75
COL6A2P12110 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.71■□□□□ 0.75
COL6A2P12110 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
COL6A2P12110 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.71■□□□□ 0.75
COL6A2P12110 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.71■□□□□ 0.75
COL6A2P12110 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.71■□□□□ 0.75
COL6A2P12110 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.71■□□□□ 0.75
COL6A2P12110 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.71■□□□□ 0.75
COL6A2P12110 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
COL6A2P12110 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.71■□□□□ 0.75
COL6A2P12110 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL6A2P12110 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.74
COL6A2P12110 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL6A2P12110 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL6A2P12110 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL6A2P12110 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL6A2P12110 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
COL6A2P12110 KRT8P20-201ENST00000423953 1409 ntBASIC19.7■□□□□ 0.74
COL6A2P12110 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.7■□□□□ 0.74
COL6A2P12110 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.7■□□□□ 0.74
COL6A2P12110 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL6A2P12110 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
COL6A2P12110 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL6A2P12110 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.7■□□□□ 0.74
COL6A2P12110 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.7■□□□□ 0.74
COL6A2P12110 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL6A2P12110 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.7■□□□□ 0.74
COL6A2P12110 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL6A2P12110 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL6A2P12110 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL6A2P12110 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
COL6A2P12110 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL6A2P12110 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL6A2P12110 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
COL6A2P12110 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL6A2P12110 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.7■□□□□ 0.74
COL6A2P12110 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.69■□□□□ 0.74
COL6A2P12110 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL6A2P12110 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
COL6A2P12110 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COL6A2P12110 AC093484.2-201ENST00000580996 2166 ntBASIC19.69■□□□□ 0.74
COL6A2P12110 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL6A2P12110 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL6A2P12110 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL6A2P12110 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.69■□□□□ 0.74
COL6A2P12110 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL6A2P12110 AP001271.2-201ENST00000624018 1556 ntBASIC19.69■□□□□ 0.74
COL6A2P12110 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL6A2P12110 AL020996.1-203ENST00000536896 2307 ntBASIC19.69■□□□□ 0.74
COL6A2P12110 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL6A2P12110 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL6A2P12110 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL6A2P12110 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL6A2P12110 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL6A2P12110 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL6A2P12110 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms