Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 TMEM179-206ENST00000616017 1645 ntBASIC21.56■■□□□ 1.04
CCDC172P0C7W6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC172P0C7W6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 DUX4L16-201ENST00000555130 1264 ntBASIC21.55■■□□□ 1.04
CCDC172P0C7W6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 AC069236.1-201ENST00000604339 616 ntBASIC21.55■■□□□ 1.04
CCDC172P0C7W6 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC172P0C7W6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 AC006015.1-201ENST00000429970 570 ntBASIC21.54■■□□□ 1.04
CCDC172P0C7W6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 AC011767.1-201ENST00000617410 1153 ntBASIC21.54■■□□□ 1.04
CCDC172P0C7W6 AC008694.1-202ENST00000636953 945 ntBASIC21.54■■□□□ 1.04
CCDC172P0C7W6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 AC068338.2-201ENST00000563278 1430 ntBASIC21.54■■□□□ 1.04
CCDC172P0C7W6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC172P0C7W6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC172P0C7W6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC172P0C7W6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC172P0C7W6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC172P0C7W6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC172P0C7W6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC172P0C7W6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC172P0C7W6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC172P0C7W6 AC231657.2-201ENST00000624556 255 ntBASIC21.53■■□□□ 1.04
CCDC172P0C7W6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC172P0C7W6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC172P0C7W6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.52■■□□□ 1.04
CCDC172P0C7W6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 KRT18P68-201ENST00000392293 1000 ntBASIC21.52■■□□□ 1.04
CCDC172P0C7W6 AC026271.2-201ENST00000428091 497 ntBASIC21.52■■□□□ 1.04
CCDC172P0C7W6 CNN2P6-201ENST00000439038 900 ntBASIC21.52■■□□□ 1.04
CCDC172P0C7W6 RARRES2P6-201ENST00000567333 442 ntBASIC21.52■■□□□ 1.04
CCDC172P0C7W6 BID-214ENST00000617586 542 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC172P0C7W6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.52■■□□□ 1.03
CCDC172P0C7W6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC172P0C7W6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC172P0C7W6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
CCDC172P0C7W6 AL691432.2-201ENST00000607222 2038 ntBASIC21.51■■□□□ 1.03
CCDC172P0C7W6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC172P0C7W6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC172P0C7W6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCDC172P0C7W6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms