Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.23■□□□□ 0.35
CSF1P09603 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1P09603 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.23■□□□□ 0.35
CSF1P09603 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CSF1P09603 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
CSF1P09603 AC093484.2-201ENST00000580996 2166 ntBASIC17.23■□□□□ 0.35
CSF1P09603 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.22■□□□□ 0.35
CSF1P09603 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.22■□□□□ 0.35
CSF1P09603 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.22■□□□□ 0.35
CSF1P09603 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.22■□□□□ 0.35
CSF1P09603 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.22■□□□□ 0.35
CSF1P09603 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.22■□□□□ 0.35
CSF1P09603 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CSF1P09603 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.22■□□□□ 0.35
CSF1P09603 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.22■□□□□ 0.35
CSF1P09603 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.22■□□□□ 0.35
CSF1P09603 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1P09603 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CSF1P09603 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSF1P09603 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.21■□□□□ 0.35
CSF1P09603 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.21■□□□□ 0.35
CSF1P09603 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.21■□□□□ 0.35
CSF1P09603 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSF1P09603 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.21■□□□□ 0.35
CSF1P09603 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSF1P09603 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.21■□□□□ 0.35
CSF1P09603 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.21■□□□□ 0.35
CSF1P09603 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CSF1P09603 AC120498.9-201ENST00000339021 3867 ntBASIC17.21■□□□□ 0.35
CSF1P09603 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSF1P09603 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSF1P09603 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSF1P09603 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CSF1P09603 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSF1P09603 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CSF1P09603 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CSF1P09603 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSF1P09603 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.21■□□□□ 0.34
CSF1P09603 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CSF1P09603 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.21■□□□□ 0.34
CSF1P09603 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.2■□□□□ 0.34
CSF1P09603 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.2■□□□□ 0.34
CSF1P09603 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CSF1P09603 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.2■□□□□ 0.34
CSF1P09603 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.2■□□□□ 0.34
CSF1P09603 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.2■□□□□ 0.34
CSF1P09603 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CSF1P09603 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CSF1P09603 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSF1P09603 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.2■□□□□ 0.34
CSF1P09603 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.19■□□□□ 0.34
CSF1P09603 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CSF1P09603 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.19■□□□□ 0.34
CSF1P09603 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSF1P09603 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.19■□□□□ 0.34
CSF1P09603 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms