Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRPL3P09001 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
MRPL3P09001 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
MRPL3P09001 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 YBX1P1-201ENST00000445822 960 ntBASIC17.89■□□□□ 0.45
MRPL3P09001 CDV3P1-201ENST00000471403 739 ntBASIC17.89■□□□□ 0.45
MRPL3P09001 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.89■□□□□ 0.45
MRPL3P09001 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL3P09001 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.89■□□□□ 0.45
MRPL3P09001 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.88■□□□□ 0.45
MRPL3P09001 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
MRPL3P09001 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.88■□□□□ 0.45
MRPL3P09001 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL3P09001 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MRPL3P09001 AP000974.1-201ENST00000623909 2387 ntBASIC17.88■□□□□ 0.45
MRPL3P09001 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.88■□□□□ 0.45
MRPL3P09001 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL3P09001 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
MRPL3P09001 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.88■□□□□ 0.45
MRPL3P09001 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.88■□□□□ 0.45
MRPL3P09001 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.88■□□□□ 0.45
MRPL3P09001 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL3P09001 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
MRPL3P09001 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
MRPL3P09001 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.88■□□□□ 0.45
MRPL3P09001 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.88■□□□□ 0.45
MRPL3P09001 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL3P09001 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL3P09001 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MRPL3P09001 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL3P09001 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL3P09001 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL3P09001 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
MRPL3P09001 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.88■□□□□ 0.45
MRPL3P09001 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.88■□□□□ 0.45
MRPL3P09001 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MRPL3P09001 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL3P09001 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL3P09001 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MRPL3P09001 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MRPL3P09001 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.87■□□□□ 0.45
MRPL3P09001 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.87■□□□□ 0.45
MRPL3P09001 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.87■□□□□ 0.45
MRPL3P09001 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.87■□□□□ 0.45
MRPL3P09001 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.87■□□□□ 0.45
MRPL3P09001 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.87■□□□□ 0.45
MRPL3P09001 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.87■□□□□ 0.45
MRPL3P09001 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MRPL3P09001 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.87■□□□□ 0.45
MRPL3P09001 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
MRPL3P09001 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.87■□□□□ 0.45
MRPL3P09001 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MRPL3P09001 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL3P09001 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MRPL3P09001 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRPL3P09001 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MRPL3P09001 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRPL3P09001 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MRPL3P09001 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRPL3P09001 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MRPL3P09001 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
MRPL3P09001 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRPL3P09001 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.86■□□□□ 0.45
MRPL3P09001 SLC7A5P1-201ENST00000568957 537 ntBASIC17.86■□□□□ 0.45
MRPL3P09001 UBE2DNL-204ENST00000602536 740 ntBASIC17.86■□□□□ 0.45
MRPL3P09001 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.86■□□□□ 0.45
MRPL3P09001 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.86■□□□□ 0.45
MRPL3P09001 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms