Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
RHOP08100 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.79■□□□□ 0.92
RHOP08100 NIFKP9-201ENST00000419265 221 ntBASIC20.79■□□□□ 0.92
RHOP08100 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.79■□□□□ 0.92
RHOP08100 KSR1P1-201ENST00000446298 240 ntBASIC20.79■□□□□ 0.92
RHOP08100 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.79■□□□□ 0.92
RHOP08100 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RHOP08100 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RHOP08100 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.79■□□□□ 0.92
RHOP08100 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.79■□□□□ 0.92
RHOP08100 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.79■□□□□ 0.92
RHOP08100 FP700111.2-201ENST00000619190 1892 ntBASIC20.79■□□□□ 0.92
RHOP08100 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RHOP08100 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHOP08100 KRT8P9-201ENST00000558927 1449 ntBASIC20.78■□□□□ 0.92
RHOP08100 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RHOP08100 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHOP08100 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.78■□□□□ 0.92
RHOP08100 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RHOP08100 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.78■□□□□ 0.92
RHOP08100 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RHOP08100 TMPOP1-202ENST00000424642 1267 ntBASIC20.78■□□□□ 0.92
RHOP08100 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.78■□□□□ 0.92
RHOP08100 MIR6786-201ENST00000616843 113 ntBASIC20.78■□□□□ 0.92
RHOP08100 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.78■□□□□ 0.92
RHOP08100 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHOP08100 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHOP08100 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHOP08100 AC005229.4-201ENST00000610085 2198 ntBASIC20.78■□□□□ 0.92
RHOP08100 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHOP08100 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHOP08100 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RHOP08100 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHOP08100 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RHOP08100 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHOP08100 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHOP08100 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHOP08100 MIR1238-201ENST00000408483 83 ntBASIC20.77■□□□□ 0.92
RHOP08100 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.77■□□□□ 0.92
RHOP08100 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.77■□□□□ 0.92
RHOP08100 RN7SL850P-201ENST00000579959 291 ntBASIC20.77■□□□□ 0.92
RHOP08100 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.77■□□□□ 0.92
RHOP08100 AC145285.6-201ENST00000604632 637 ntBASIC20.77■□□□□ 0.92
RHOP08100 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.77■□□□□ 0.92
RHOP08100 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHOP08100 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RHOP08100 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.77■□□□□ 0.91
RHOP08100 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
RHOP08100 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHOP08100 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHOP08100 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHOP08100 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
RHOP08100 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHOP08100 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHOP08100 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.76■□□□□ 0.91
RHOP08100 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.76■□□□□ 0.91
RHOP08100 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.76■□□□□ 0.91
RHOP08100 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.76■□□□□ 0.91
RHOP08100 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.76■□□□□ 0.91
RHOP08100 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHOP08100 KRT16P1-201ENST00000399124 1418 ntBASIC20.76■□□□□ 0.91
RHOP08100 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RHOP08100 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
RHOP08100 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RHOP08100 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RHOP08100 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RHOP08100 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.75■□□□□ 0.91
RHOP08100 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.75■□□□□ 0.91
RHOP08100 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RHOP08100 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RHOP08100 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
RHOP08100 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHOP08100 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RHOP08100 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.75■□□□□ 0.91
RHOP08100 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RHOP08100 AC116562.2-201ENST00000507042 360 ntBASIC20.75■□□□□ 0.91
RHOP08100 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RHOP08100 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHOP08100 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.74■□□□□ 0.91
RHOP08100 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 DPP3P2-201ENST00000416030 1696 ntBASIC20.74■□□□□ 0.91
RHOP08100 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.74■□□□□ 0.91
RHOP08100 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.74■□□□□ 0.91
RHOP08100 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.74■□□□□ 0.91
RHOP08100 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RHOP08100 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RHOP08100 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RHOP08100 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.74■□□□□ 0.91
RHOP08100 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RHOP08100 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.74■□□□□ 0.91
RHOP08100 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms