Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.37■■□□□ 1.17
TPM3P06753 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TPM3P06753 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TPM3P06753 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.37■■□□□ 1.17
TPM3P06753 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TPM3P06753 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.37■■□□□ 1.17
TPM3P06753 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TPM3P06753 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
TPM3P06753 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.36■■□□□ 1.17
TPM3P06753 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.36■■□□□ 1.17
TPM3P06753 NEFHP1-201ENST00000412845 2629 ntBASIC22.36■■□□□ 1.17
TPM3P06753 KRT87P-202ENST00000534226 1464 ntBASIC22.36■■□□□ 1.17
TPM3P06753 TREX1-205ENST00000625293 1783 ntBASIC22.36■■□□□ 1.17
TPM3P06753 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
TPM3P06753 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.36■■□□□ 1.17
TPM3P06753 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.36■■□□□ 1.17
TPM3P06753 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
TPM3P06753 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
TPM3P06753 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPM3P06753 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TPM3P06753 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.35■■□□□ 1.17
TPM3P06753 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
TPM3P06753 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TPM3P06753 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TPM3P06753 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TPM3P06753 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
TPM3P06753 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.35■■□□□ 1.17
TPM3P06753 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TPM3P06753 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.35■■□□□ 1.17
TPM3P06753 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
TPM3P06753 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.35■■□□□ 1.17
TPM3P06753 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TPM3P06753 RASA4CP-201ENST00000424092 1398 ntBASIC22.35■■□□□ 1.17
TPM3P06753 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TPM3P06753 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TPM3P06753 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TPM3P06753 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TPM3P06753 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.34■■□□□ 1.17
TPM3P06753 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.34■■□□□ 1.17
TPM3P06753 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TPM3P06753 EDA-201ENST00000338901 1233 ntBASIC22.34■■□□□ 1.17
TPM3P06753 AC079140.4-201ENST00000507448 529 ntBASIC22.34■■□□□ 1.17
TPM3P06753 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.34■■□□□ 1.17
TPM3P06753 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
TPM3P06753 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.34■■□□□ 1.17
TPM3P06753 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.34■■□□□ 1.17
TPM3P06753 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TPM3P06753 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TPM3P06753 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
TPM3P06753 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TPM3P06753 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TPM3P06753 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
TPM3P06753 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.33■■□□□ 1.17
TPM3P06753 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TPM3P06753 AP001330.3-201ENST00000520123 633 ntBASIC22.33■■□□□ 1.17
TPM3P06753 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.33■■□□□ 1.17
TPM3P06753 TPRG1LP1-201ENST00000598702 760 ntBASIC22.33■■□□□ 1.17
TPM3P06753 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.33■■□□□ 1.17
TPM3P06753 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TPM3P06753 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TPM3P06753 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
TPM3P06753 AC005082.1-201ENST00000413042 2259 ntBASIC22.33■■□□□ 1.16
TPM3P06753 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TPM3P06753 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
TPM3P06753 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TPM3P06753 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
TPM3P06753 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TPM3P06753 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.32■■□□□ 1.16
TPM3P06753 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.32■■□□□ 1.16
TPM3P06753 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.32■■□□□ 1.16
TPM3P06753 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 PBX2P1-201ENST00000493219 1291 ntBASIC22.32■■□□□ 1.16
TPM3P06753 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.32■■□□□ 1.16
TPM3P06753 AL354811.1-201ENST00000610286 706 ntBASIC22.32■■□□□ 1.16
TPM3P06753 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.32■■□□□ 1.16
TPM3P06753 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPM3P06753 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms