Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CHRNA1P02708 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRNA1P02708 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRNA1P02708 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRNA1P02708 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.85■■□□□ 1.09
CHRNA1P02708 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRNA1P02708 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRNA1P02708 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRNA1P02708 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.85■■□□□ 1.09
CHRNA1P02708 KRT8P9-201ENST00000558927 1449 ntBASIC21.85■■□□□ 1.09
CHRNA1P02708 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRNA1P02708 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRNA1P02708 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.84■■□□□ 1.09
CHRNA1P02708 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.84■■□□□ 1.09
CHRNA1P02708 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.84■■□□□ 1.09
CHRNA1P02708 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRNA1P02708 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRNA1P02708 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRNA1P02708 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.84■■□□□ 1.09
CHRNA1P02708 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.84■■□□□ 1.09
CHRNA1P02708 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRNA1P02708 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHRNA1P02708 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRNA1P02708 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CHRNA1P02708 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.84■■□□□ 1.09
CHRNA1P02708 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CHRNA1P02708 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRNA1P02708 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CHRNA1P02708 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.83■■□□□ 1.09
CHRNA1P02708 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.83■■□□□ 1.09
CHRNA1P02708 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHRNA1P02708 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.83■■□□□ 1.09
CHRNA1P02708 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHRNA1P02708 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHRNA1P02708 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CHRNA1P02708 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHRNA1P02708 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHRNA1P02708 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CHRNA1P02708 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
CHRNA1P02708 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.83■■□□□ 1.09
CHRNA1P02708 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CHRNA1P02708 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHRNA1P02708 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CHRNA1P02708 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHRNA1P02708 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA1P02708 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA1P02708 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRNA1P02708 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRNA1P02708 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.82■■□□□ 1.08
CHRNA1P02708 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CHRNA1P02708 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRNA1P02708 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA1P02708 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRNA1P02708 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA1P02708 AP000525.1-201ENST00000608286 694 ntBASIC21.82■■□□□ 1.08
CHRNA1P02708 CR392000.1-201ENST00000624770 1228 ntBASIC21.82■■□□□ 1.08
CHRNA1P02708 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.82■■□□□ 1.08
CHRNA1P02708 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CHRNA1P02708 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA1P02708 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA1P02708 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA1P02708 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CHRNA1P02708 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.82■■□□□ 1.08
CHRNA1P02708 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRNA1P02708 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRNA1P02708 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA1P02708 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRNA1P02708 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CHRNA1P02708 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA1P02708 NIFKP9-201ENST00000419265 221 ntBASIC21.81■■□□□ 1.08
CHRNA1P02708 KSR1P1-201ENST00000446298 240 ntBASIC21.81■■□□□ 1.08
CHRNA1P02708 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.81■■□□□ 1.08
CHRNA1P02708 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA1P02708 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.81■■□□□ 1.08
CHRNA1P02708 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRNA1P02708 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CHRNA1P02708 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA1P02708 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRNA1P02708 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA1P02708 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNA1P02708 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA1P02708 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA1P02708 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA1P02708 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA1P02708 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.8■■□□□ 1.08
CHRNA1P02708 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA1P02708 DPP3P2-201ENST00000416030 1696 ntBASIC21.8■■□□□ 1.08
CHRNA1P02708 AC006128.1-201ENST00000624704 1661 ntBASIC21.8■■□□□ 1.08
CHRNA1P02708 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA1P02708 UNC93B2-201ENST00000285383 730 ntBASIC21.8■■□□□ 1.08
CHRNA1P02708 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA1P02708 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CHRNA1P02708 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.8■■□□□ 1.08
CHRNA1P02708 AC116562.2-201ENST00000507042 360 ntBASIC21.8■■□□□ 1.08
CHRNA1P02708 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.8■■□□□ 1.08
CHRNA1P02708 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA1P02708 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNA1P02708 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CHRNA1P02708 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNA1P02708 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms