Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.62■□□□□ 0.41
APOC1P02654 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
APOC1P02654 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
APOC1P02654 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.61■□□□□ 0.41
APOC1P02654 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
APOC1P02654 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.61■□□□□ 0.41
APOC1P02654 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.61■□□□□ 0.41
APOC1P02654 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOC1P02654 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOC1P02654 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOC1P02654 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.61■□□□□ 0.41
APOC1P02654 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.61■□□□□ 0.41
APOC1P02654 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.61■□□□□ 0.41
APOC1P02654 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.61■□□□□ 0.41
APOC1P02654 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.61■□□□□ 0.41
APOC1P02654 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.61■□□□□ 0.41
APOC1P02654 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.61■□□□□ 0.41
APOC1P02654 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.61■□□□□ 0.41
APOC1P02654 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOC1P02654 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
APOC1P02654 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
APOC1P02654 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
APOC1P02654 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOC1P02654 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.61■□□□□ 0.41
APOC1P02654 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOC1P02654 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.61■□□□□ 0.41
APOC1P02654 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.61■□□□□ 0.41
APOC1P02654 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
APOC1P02654 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
APOC1P02654 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.6■□□□□ 0.41
APOC1P02654 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.6■□□□□ 0.41
APOC1P02654 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
APOC1P02654 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
APOC1P02654 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 MCRIP2P1-201ENST00000394346 511 ntBASIC17.6■□□□□ 0.41
APOC1P02654 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.6■□□□□ 0.41
APOC1P02654 RARRES2P6-201ENST00000567333 442 ntBASIC17.6■□□□□ 0.41
APOC1P02654 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.6■□□□□ 0.41
APOC1P02654 MFSD11-216ENST00000590393 1141 ntBASIC17.6■□□□□ 0.41
APOC1P02654 MIR5787-201ENST00000611784 55 ntBASIC17.6■□□□□ 0.41
APOC1P02654 AC008694.1-202ENST00000636953 945 ntBASIC17.6■□□□□ 0.41
APOC1P02654 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.6■□□□□ 0.41
APOC1P02654 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOC1P02654 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.59■□□□□ 0.41
APOC1P02654 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 SMG8-203ENST00000578922 2178 ntBASIC17.59■□□□□ 0.41
APOC1P02654 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
APOC1P02654 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
APOC1P02654 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.59■□□□□ 0.41
APOC1P02654 RARRES2P4-201ENST00000514074 484 ntBASIC17.59■□□□□ 0.41
APOC1P02654 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.59■□□□□ 0.41
APOC1P02654 AC069236.1-201ENST00000604339 616 ntBASIC17.59■□□□□ 0.41
APOC1P02654 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.59■□□□□ 0.41
APOC1P02654 AC231657.2-201ENST00000624556 255 ntBASIC17.59■□□□□ 0.41
APOC1P02654 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
APOC1P02654 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
APOC1P02654 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOC1P02654 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.59■□□□□ 0.41
APOC1P02654 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
APOC1P02654 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.58■□□□□ 0.41
APOC1P02654 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.58■□□□□ 0.41
APOC1P02654 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.58■□□□□ 0.41
APOC1P02654 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
APOC1P02654 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
APOC1P02654 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
APOC1P02654 AC090340.1-201ENST00000620778 4980 ntBASIC17.58■□□□□ 0.4
APOC1P02654 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APOC1P02654 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
APOC1P02654 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
APOC1P02654 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms