Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.8■□□□□ 0.44
APOA1P02647 MIR3181-201ENST00000578512 73 ntBASIC17.8■□□□□ 0.44
APOA1P02647 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.8■□□□□ 0.44
APOA1P02647 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOA1P02647 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOA1P02647 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APOA1P02647 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOA1P02647 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
APOA1P02647 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APOA1P02647 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOA1P02647 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APOA1P02647 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APOA1P02647 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.8■□□□□ 0.44
APOA1P02647 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
APOA1P02647 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
APOA1P02647 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
APOA1P02647 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.79■□□□□ 0.44
APOA1P02647 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
APOA1P02647 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
APOA1P02647 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
APOA1P02647 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.79■□□□□ 0.44
APOA1P02647 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
APOA1P02647 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
APOA1P02647 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
APOA1P02647 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
APOA1P02647 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.79■□□□□ 0.44
APOA1P02647 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.79■□□□□ 0.44
APOA1P02647 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APOA1P02647 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
APOA1P02647 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.79■□□□□ 0.44
APOA1P02647 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
APOA1P02647 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.78■□□□□ 0.44
APOA1P02647 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.78■□□□□ 0.44
APOA1P02647 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.78■□□□□ 0.44
APOA1P02647 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
APOA1P02647 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
APOA1P02647 AC010525.1-201ENST00000585559 441 ntBASIC17.78■□□□□ 0.44
APOA1P02647 AC011484.1-201ENST00000377652 1995 ntBASIC17.78■□□□□ 0.44
APOA1P02647 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
APOA1P02647 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
APOA1P02647 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.78■□□□□ 0.44
APOA1P02647 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APOA1P02647 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.78■□□□□ 0.44
APOA1P02647 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.77■□□□□ 0.44
APOA1P02647 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.77■□□□□ 0.44
APOA1P02647 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.77■□□□□ 0.44
APOA1P02647 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.77■□□□□ 0.44
APOA1P02647 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
APOA1P02647 AC092720.2-201ENST00000602388 1665 ntBASIC17.77■□□□□ 0.44
APOA1P02647 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APOA1P02647 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
APOA1P02647 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
APOA1P02647 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
APOA1P02647 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APOA1P02647 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.77■□□□□ 0.44
APOA1P02647 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.77■□□□□ 0.44
APOA1P02647 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.77■□□□□ 0.44
APOA1P02647 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APOA1P02647 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
APOA1P02647 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.77■□□□□ 0.44
APOA1P02647 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.77■□□□□ 0.44
APOA1P02647 AC099791.2-201ENST00000605725 427 ntBASIC17.77■□□□□ 0.44
APOA1P02647 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.77■□□□□ 0.44
APOA1P02647 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
APOA1P02647 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.77■□□□□ 0.44
APOA1P02647 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.77■□□□□ 0.44
APOA1P02647 AC093484.2-201ENST00000580996 2166 ntBASIC17.77■□□□□ 0.43
APOA1P02647 AL138781.2-201ENST00000617896 1843 ntBASIC17.77■□□□□ 0.43
APOA1P02647 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
APOA1P02647 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
APOA1P02647 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.77■□□□□ 0.43
APOA1P02647 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
APOA1P02647 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
APOA1P02647 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
APOA1P02647 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
APOA1P02647 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms