Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 KRT16P6-202ENST00000425692 1426 ntBASIC21.52■■□□□ 1.04
HLA-DRAP01903 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRAP01903 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.52■■□□□ 1.04
HLA-DRAP01903 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HLA-DRAP01903 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.52■■□□□ 1.03
HLA-DRAP01903 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HLA-DRAP01903 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
HLA-DRAP01903 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.51■■□□□ 1.03
HLA-DRAP01903 AL691432.2-201ENST00000607222 2038 ntBASIC21.51■■□□□ 1.03
HLA-DRAP01903 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.51■■□□□ 1.03
HLA-DRAP01903 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.51■■□□□ 1.03
HLA-DRAP01903 PCDHAC2-203ENST00000615316 3011 ntBASIC21.51■■□□□ 1.03
HLA-DRAP01903 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 AL390719.1-204ENST00000412397 1219 ntBASIC21.51■■□□□ 1.03
HLA-DRAP01903 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.51■■□□□ 1.03
HLA-DRAP01903 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.51■■□□□ 1.03
HLA-DRAP01903 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.51■■□□□ 1.03
HLA-DRAP01903 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.51■■□□□ 1.03
HLA-DRAP01903 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.51■■□□□ 1.03
HLA-DRAP01903 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.51■■□□□ 1.03
HLA-DRAP01903 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DRAP01903 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
HLA-DRAP01903 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DRAP01903 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DRAP01903 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DRAP01903 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DRAP01903 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HLA-DRAP01903 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.5■■□□□ 1.03
HLA-DRAP01903 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HLA-DRAP01903 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.5■■□□□ 1.03
HLA-DRAP01903 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.5■■□□□ 1.03
HLA-DRAP01903 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HLA-DRAP01903 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.5■■□□□ 1.03
HLA-DRAP01903 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
HLA-DRAP01903 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DRAP01903 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
HLA-DRAP01903 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DRAP01903 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DRAP01903 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DRAP01903 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DRAP01903 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DRAP01903 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 RNA5SP413-201ENST00000516373 109 ntBASIC21.49■■□□□ 1.03
HLA-DRAP01903 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 KRT18P6-201ENST00000555540 1265 ntBASIC21.49■■□□□ 1.03
HLA-DRAP01903 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DRAP01903 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DRAP01903 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.49■■□□□ 1.03
HLA-DRAP01903 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DRAP01903 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DRAP01903 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.48■■□□□ 1.03
HLA-DRAP01903 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DRAP01903 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
HLA-DRAP01903 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.48■■□□□ 1.03
HLA-DRAP01903 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DRAP01903 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DRAP01903 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms