Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFBP01127 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.22■□□□□ 0.83
PDGFBP01127 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFBP01127 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFBP01127 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PDGFBP01127 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFBP01127 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PDGFBP01127 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFBP01127 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDGFBP01127 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.21■□□□□ 0.83
PDGFBP01127 AC246785.2-201ENST00000432512 513 ntBASIC20.21■□□□□ 0.83
PDGFBP01127 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.21■□□□□ 0.83
PDGFBP01127 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.21■□□□□ 0.83
PDGFBP01127 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.21■□□□□ 0.83
PDGFBP01127 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.21■□□□□ 0.83
PDGFBP01127 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.21■□□□□ 0.83
PDGFBP01127 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
PDGFBP01127 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
PDGFBP01127 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFBP01127 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFBP01127 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFBP01127 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PDGFBP01127 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDGFBP01127 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.2■□□□□ 0.83
PDGFBP01127 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PDGFBP01127 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFBP01127 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.2■□□□□ 0.82
PDGFBP01127 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFBP01127 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFBP01127 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFBP01127 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.2■□□□□ 0.82
PDGFBP01127 AC004980.1-204ENST00000429707 299 ntBASIC20.2■□□□□ 0.82
PDGFBP01127 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.2■□□□□ 0.82
PDGFBP01127 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.2■□□□□ 0.82
PDGFBP01127 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFBP01127 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PDGFBP01127 AC127496.7-201ENST00000625110 1798 ntBASIC20.2■□□□□ 0.82
PDGFBP01127 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFBP01127 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFBP01127 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFBP01127 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PDGFBP01127 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.19■□□□□ 0.82
PDGFBP01127 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.19■□□□□ 0.82
PDGFBP01127 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 AL691432.3-201ENST00000621860 400 ntBASIC20.19■□□□□ 0.82
PDGFBP01127 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 AC005332.1-201ENST00000577698 1310 ntBASIC20.19■□□□□ 0.82
PDGFBP01127 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PDGFBP01127 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.19■□□□□ 0.82
PDGFBP01127 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFBP01127 KRT8P36-201ENST00000489121 1440 ntBASIC20.19■□□□□ 0.82
PDGFBP01127 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.18■□□□□ 0.82
PDGFBP01127 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.18■□□□□ 0.82
PDGFBP01127 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFBP01127 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PDGFBP01127 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFBP01127 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.18■□□□□ 0.82
PDGFBP01127 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PDGFBP01127 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.18■□□□□ 0.82
PDGFBP01127 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFBP01127 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PDGFBP01127 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PDGFBP01127 AL359075.1-203ENST00000462729 1002 ntBASIC20.18■□□□□ 0.82
PDGFBP01127 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFBP01127 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.18■□□□□ 0.82
PDGFBP01127 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.18■□□□□ 0.82
PDGFBP01127 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.18■□□□□ 0.82
PDGFBP01127 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.18■□□□□ 0.82
PDGFBP01127 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFBP01127 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFBP01127 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFBP01127 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PDGFBP01127 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PDGFBP01127 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFBP01127 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFBP01127 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFBP01127 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFBP01127 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFBP01127 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PDGFBP01127 C1orf229-201ENST00000623686 2258 ntBASIC20.17■□□□□ 0.82
PDGFBP01127 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PDGFBP01127 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDGFBP01127 AP000347.1-202ENST00000435868 847 ntBASIC20.17■□□□□ 0.82
PDGFBP01127 AL671277.2-201ENST00000458060 996 ntBASIC20.17■□□□□ 0.82
PDGFBP01127 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.17■□□□□ 0.82
PDGFBP01127 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFBP01127 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFBP01127 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.17■□□□□ 0.82
PDGFBP01127 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFBP01127 AC116407.4-201ENST00000623319 1061 ntBASIC20.17■□□□□ 0.82
PDGFBP01127 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.17■□□□□ 0.82
PDGFBP01127 AC141257.4-201ENST00000634557 245 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms