Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PRAMEF2O60811 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 SMG8-203ENST00000578922 2178 ntBASIC18.74■□□□□ 0.59
PRAMEF2O60811 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.74■□□□□ 0.59
PRAMEF2O60811 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 AL512408.1-201ENST00000569378 2000 ntBASIC18.74■□□□□ 0.59
PRAMEF2O60811 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 AC073130.3-201ENST00000624389 2278 ntBASIC18.74■□□□□ 0.59
PRAMEF2O60811 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF2O60811 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF2O60811 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF2O60811 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF2O60811 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 KRT17P3-201ENST00000420566 1262 ntBASIC18.73■□□□□ 0.59
PRAMEF2O60811 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF2O60811 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF2O60811 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF2O60811 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF2O60811 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF2O60811 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEF2O60811 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 SOX15-203ENST00000570788 1093 ntBASIC18.72■□□□□ 0.59
PRAMEF2O60811 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 AL162377.1-201ENST00000618844 1793 ntBASIC18.72■□□□□ 0.59
PRAMEF2O60811 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 RNF165-205ENST00000588679 2904 ntBASIC18.72■□□□□ 0.59
PRAMEF2O60811 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF2O60811 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.72■□□□□ 0.59
PRAMEF2O60811 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.71■□□□□ 0.59
PRAMEF2O60811 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF2O60811 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF2O60811 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF2O60811 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.71■□□□□ 0.59
PRAMEF2O60811 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.71■□□□□ 0.59
PRAMEF2O60811 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PRAMEF2O60811 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF2O60811 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF2O60811 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF2O60811 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PRAMEF2O60811 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF2O60811 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.71■□□□□ 0.59
PRAMEF2O60811 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
PRAMEF2O60811 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PRAMEF2O60811 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PRAMEF2O60811 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms