Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.62■□□□□ 0.89
TSPAN3O60637 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN3O60637 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN3O60637 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN3O60637 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN3O60637 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN3O60637 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN3O60637 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN3O60637 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TSPAN3O60637 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
TSPAN3O60637 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.61■□□□□ 0.89
TSPAN3O60637 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.61■□□□□ 0.89
TSPAN3O60637 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.61■□□□□ 0.89
TSPAN3O60637 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN3O60637 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TSPAN3O60637 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.61■□□□□ 0.89
TSPAN3O60637 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.61■□□□□ 0.89
TSPAN3O60637 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TSPAN3O60637 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.61■□□□□ 0.89
TSPAN3O60637 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN3O60637 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.61■□□□□ 0.89
TSPAN3O60637 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN3O60637 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN3O60637 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.6■□□□□ 0.89
TSPAN3O60637 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
TSPAN3O60637 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN3O60637 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.6■□□□□ 0.89
TSPAN3O60637 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.6■□□□□ 0.89
TSPAN3O60637 KRASP1-201ENST00000407852 552 ntBASIC20.6■□□□□ 0.89
TSPAN3O60637 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN3O60637 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.6■□□□□ 0.89
TSPAN3O60637 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.6■□□□□ 0.89
TSPAN3O60637 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.6■□□□□ 0.89
TSPAN3O60637 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.6■□□□□ 0.89
TSPAN3O60637 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.6■□□□□ 0.89
TSPAN3O60637 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.6■□□□□ 0.89
TSPAN3O60637 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TSPAN3O60637 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN3O60637 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN3O60637 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TSPAN3O60637 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.6■□□□□ 0.89
TSPAN3O60637 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.59■□□□□ 0.89
TSPAN3O60637 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN3O60637 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
TSPAN3O60637 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN3O60637 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TSPAN3O60637 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN3O60637 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN3O60637 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN3O60637 AC239809.2-201ENST00000415381 517 ntBASIC20.59■□□□□ 0.89
TSPAN3O60637 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.59■□□□□ 0.89
TSPAN3O60637 UBE2SP1-201ENST00000450587 669 ntBASIC20.59■□□□□ 0.89
TSPAN3O60637 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.59■□□□□ 0.89
TSPAN3O60637 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TSPAN3O60637 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.59■□□□□ 0.89
TSPAN3O60637 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.59■□□□□ 0.89
TSPAN3O60637 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN3O60637 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN3O60637 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN3O60637 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN3O60637 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.59■□□□□ 0.89
TSPAN3O60637 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TSPAN3O60637 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.58■□□□□ 0.89
TSPAN3O60637 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
TSPAN3O60637 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.58■□□□□ 0.89
TSPAN3O60637 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TSPAN3O60637 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TSPAN3O60637 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TSPAN3O60637 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
TSPAN3O60637 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.58■□□□□ 0.89
TSPAN3O60637 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.58■□□□□ 0.89
TSPAN3O60637 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.58■□□□□ 0.89
TSPAN3O60637 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.58■□□□□ 0.89
TSPAN3O60637 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.58■□□□□ 0.89
TSPAN3O60637 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.58■□□□□ 0.89
TSPAN3O60637 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.58■□□□□ 0.89
TSPAN3O60637 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TSPAN3O60637 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TSPAN3O60637 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TSPAN3O60637 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
TSPAN3O60637 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TSPAN3O60637 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.57■□□□□ 0.88
TSPAN3O60637 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.57■□□□□ 0.88
TSPAN3O60637 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.57■□□□□ 0.88
TSPAN3O60637 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.57■□□□□ 0.88
TSPAN3O60637 AC124016.1-201ENST00000609552 612 ntBASIC20.57■□□□□ 0.88
TSPAN3O60637 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.57■□□□□ 0.88
TSPAN3O60637 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TSPAN3O60637 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.56■□□□□ 0.88
TSPAN3O60637 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms