Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.63■□□□□ 0.73
VEGFDO43915 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VEGFDO43915 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VEGFDO43915 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.62■□□□□ 0.73
VEGFDO43915 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VEGFDO43915 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VEGFDO43915 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.62■□□□□ 0.73
VEGFDO43915 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.62■□□□□ 0.73
VEGFDO43915 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.62■□□□□ 0.73
VEGFDO43915 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.62■□□□□ 0.73
VEGFDO43915 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VEGFDO43915 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VEGFDO43915 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VEGFDO43915 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VEGFDO43915 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.62■□□□□ 0.73
VEGFDO43915 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.62■□□□□ 0.73
VEGFDO43915 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.62■□□□□ 0.73
VEGFDO43915 AC233263.1-201ENST00000578059 224 ntBASIC19.62■□□□□ 0.73
VEGFDO43915 MTDHP1-201ENST00000605323 784 ntBASIC19.62■□□□□ 0.73
VEGFDO43915 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VEGFDO43915 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
VEGFDO43915 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VEGFDO43915 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VEGFDO43915 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VEGFDO43915 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VEGFDO43915 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.61■□□□□ 0.73
VEGFDO43915 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VEGFDO43915 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.61■□□□□ 0.73
VEGFDO43915 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VEGFDO43915 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.61■□□□□ 0.73
VEGFDO43915 PRKY-204ENST00000533551 1019 ntBASIC19.61■□□□□ 0.73
VEGFDO43915 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.61■□□□□ 0.73
VEGFDO43915 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
VEGFDO43915 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VEGFDO43915 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VEGFDO43915 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VEGFDO43915 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.61■□□□□ 0.73
VEGFDO43915 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.6■□□□□ 0.73
VEGFDO43915 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
VEGFDO43915 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 AC124283.5-201ENST00000624661 1809 ntBASIC19.6■□□□□ 0.73
VEGFDO43915 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.6■□□□□ 0.73
VEGFDO43915 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VEGFDO43915 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.6■□□□□ 0.73
VEGFDO43915 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.6■□□□□ 0.73
VEGFDO43915 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.6■□□□□ 0.73
VEGFDO43915 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.6■□□□□ 0.73
VEGFDO43915 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.6■□□□□ 0.73
VEGFDO43915 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VEGFDO43915 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.6■□□□□ 0.73
VEGFDO43915 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VEGFDO43915 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VEGFDO43915 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VEGFDO43915 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.59■□□□□ 0.73
VEGFDO43915 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VEGFDO43915 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VEGFDO43915 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.59■□□□□ 0.73
VEGFDO43915 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VEGFDO43915 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VEGFDO43915 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
VEGFDO43915 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.59■□□□□ 0.73
VEGFDO43915 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.59■□□□□ 0.73
VEGFDO43915 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
VEGFDO43915 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.59■□□□□ 0.73
VEGFDO43915 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.59■□□□□ 0.73
VEGFDO43915 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
VEGFDO43915 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.59■□□□□ 0.73
VEGFDO43915 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VEGFDO43915 LINC01006-201ENST00000333319 2292 ntBASIC19.59■□□□□ 0.73
VEGFDO43915 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.59■□□□□ 0.73
VEGFDO43915 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VEGFDO43915 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VEGFDO43915 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.58■□□□□ 0.73
VEGFDO43915 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VEGFDO43915 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.58■□□□□ 0.73
VEGFDO43915 AC092667.1-201ENST00000434301 2586 ntBASIC19.58■□□□□ 0.73
VEGFDO43915 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VEGFDO43915 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
VEGFDO43915 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms