Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 KRT8P17-201ENST00000453110 1448 ntBASIC22.97■■□□□ 1.27
ATP2A1O14983 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.97■■□□□ 1.27
ATP2A1O14983 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.97■■□□□ 1.27
ATP2A1O14983 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
ATP2A1O14983 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
ATP2A1O14983 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
ATP2A1O14983 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 AL355075.4-201ENST00000554988 638 ntBASIC22.96■■□□□ 1.27
ATP2A1O14983 AL353708.3-201ENST00000610272 989 ntBASIC22.96■■□□□ 1.27
ATP2A1O14983 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.96■■□□□ 1.27
ATP2A1O14983 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.96■■□□□ 1.27
ATP2A1O14983 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
ATP2A1O14983 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
ATP2A1O14983 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP2A1O14983 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.96■■□□□ 1.27
ATP2A1O14983 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ATP2A1O14983 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ATP2A1O14983 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.95■■□□□ 1.26
ATP2A1O14983 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
ATP2A1O14983 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
ATP2A1O14983 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ATP2A1O14983 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.95■■□□□ 1.26
ATP2A1O14983 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.95■■□□□ 1.26
ATP2A1O14983 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.95■■□□□ 1.26
ATP2A1O14983 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
ATP2A1O14983 AC004264.1-201ENST00000608354 794 ntBASIC22.95■■□□□ 1.26
ATP2A1O14983 AC026471.5-201ENST00000615068 467 ntBASIC22.95■■□□□ 1.26
ATP2A1O14983 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.95■■□□□ 1.26
ATP2A1O14983 LINC00565-201ENST00000562710 2331 ntBASIC22.94■■□□□ 1.26
ATP2A1O14983 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
ATP2A1O14983 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.94■■□□□ 1.26
ATP2A1O14983 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ATP2A1O14983 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ATP2A1O14983 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
ATP2A1O14983 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.94■■□□□ 1.26
ATP2A1O14983 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.94■■□□□ 1.26
ATP2A1O14983 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
ATP2A1O14983 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.94■■□□□ 1.26
ATP2A1O14983 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP2A1O14983 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.93■■□□□ 1.26
ATP2A1O14983 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ATP2A1O14983 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP2A1O14983 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ATP2A1O14983 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.93■■□□□ 1.26
ATP2A1O14983 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
ATP2A1O14983 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.93■■□□□ 1.26
ATP2A1O14983 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.93■■□□□ 1.26
ATP2A1O14983 CD177P1-201ENST00000606252 935 ntBASIC22.93■■□□□ 1.26
ATP2A1O14983 AC073195.1-201ENST00000607241 877 ntBASIC22.93■■□□□ 1.26
ATP2A1O14983 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.93■■□□□ 1.26
ATP2A1O14983 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP2A1O14983 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
ATP2A1O14983 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.93■■□□□ 1.26
ATP2A1O14983 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP2A1O14983 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP2A1O14983 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
ATP2A1O14983 AC005229.4-201ENST00000610085 2198 ntBASIC22.93■■□□□ 1.26
ATP2A1O14983 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP2A1O14983 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
ATP2A1O14983 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.92■■□□□ 1.26
ATP2A1O14983 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ATP2A1O14983 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.92■■□□□ 1.26
ATP2A1O14983 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP2A1O14983 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.92■■□□□ 1.26
ATP2A1O14983 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ATP2A1O14983 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
ATP2A1O14983 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.92■■□□□ 1.26
ATP2A1O14983 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP2A1O14983 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ATP2A1O14983 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
ATP2A1O14983 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.92■■□□□ 1.26
ATP2A1O14983 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.92■■□□□ 1.26
ATP2A1O14983 AP003071.4-201ENST00000562276 1284 ntBASIC22.92■■□□□ 1.26
ATP2A1O14983 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.92■■□□□ 1.26
ATP2A1O14983 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ATP2A1O14983 AC006128.1-201ENST00000624704 1661 ntBASIC22.92■■□□□ 1.26
ATP2A1O14983 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP2A1O14983 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP2A1O14983 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.92■■□□□ 1.26
ATP2A1O14983 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP2A1O14983 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
ATP2A1O14983 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
ATP2A1O14983 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP2A1O14983 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.92■■□□□ 1.26
ATP2A1O14983 AF106564.1-201ENST00000607058 2553 ntBASIC22.92■■□□□ 1.26
ATP2A1O14983 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
ATP2A1O14983 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP2A1O14983 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP2A1O14983 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP2A1O14983 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP2A1O14983 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms