Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.46■□□□□ 0.54
TNFRSF11BO00300 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
TNFRSF11BO00300 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.45■□□□□ 0.54
TNFRSF11BO00300 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.45■□□□□ 0.54
TNFRSF11BO00300 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 LINC02228-203ENST00000641970 1355 ntBASIC18.44■□□□□ 0.54
TNFRSF11BO00300 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 AC027612.3-201ENST00000413684 1047 ntBASIC18.44■□□□□ 0.54
TNFRSF11BO00300 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.44■□□□□ 0.54
TNFRSF11BO00300 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 CDV3P1-201ENST00000471403 739 ntBASIC18.43■□□□□ 0.54
TNFRSF11BO00300 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFRSF11BO00300 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.42■□□□□ 0.54
TNFRSF11BO00300 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms