Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 AC083906.2-201ENST00000511578 360 ntBASIC17.72■□□□□ 0.43
NPIPB4C9JG80 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 GUSBP6-202ENST00000438529 1198 ntBASIC17.71■□□□□ 0.43
NPIPB4C9JG80 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.71■□□□□ 0.43
NPIPB4C9JG80 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPB4C9JG80 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
NPIPB4C9JG80 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NPIPB4C9JG80 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB4C9JG80 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 SLC29A4P1-201ENST00000398760 971 ntBASIC17.69■□□□□ 0.42
NPIPB4C9JG80 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 TSPY6P-201ENST00000448518 926 ntBASIC17.69■□□□□ 0.42
NPIPB4C9JG80 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 PCDHAC2-203ENST00000615316 3011 ntBASIC17.69■□□□□ 0.42
NPIPB4C9JG80 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NPIPB4C9JG80 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 DUSP5P2-201ENST00000426873 1033 ntBASIC17.68■□□□□ 0.42
NPIPB4C9JG80 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 AC091874.3-201ENST00000512672 1195 ntBASIC17.68■□□□□ 0.42
NPIPB4C9JG80 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 AC005829.2-201ENST00000571422 1056 ntBASIC17.68■□□□□ 0.42
NPIPB4C9JG80 MIR4758-201ENST00000577688 71 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms