Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 PGM5P4-201ENST00000421970 445 ntBASIC20■□□□□ 0.79
TRIM49D1C9J1S8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 UBE2DNL-204ENST00000602536 740 ntBASIC20■□□□□ 0.79
TRIM49D1C9J1S8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49D1C9J1S8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM49D1C9J1S8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 TNXA-203ENST00000507684 2038 ntBASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM49D1C9J1S8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 KRT19P1-201ENST00000405746 1186 ntBASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 KRT18P61-201ENST00000585825 1298 ntBASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM49D1C9J1S8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49D1C9J1S8 CYP21A1P-202ENST00000354927 1481 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms