Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 AC116562.4-201ENST00000641316 2276 ntBASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 AL691432.2-201ENST00000607222 2038 ntBASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 AL589743.5-201ENST00000616611 1050 ntBASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PRAMEF25A6NGN4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 KRT18P68-201ENST00000392293 1000 ntBASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 LSM12P1-201ENST00000411836 588 ntBASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 AL138781.1-201ENST00000566567 1274 ntBASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PRAMEF25A6NGN4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 KRT17P1-201ENST00000399211 1546 ntBASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 DPP3P2-201ENST00000416030 1696 ntBASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 AC142086.2-201ENST00000569753 217 ntBASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 MIR4758-201ENST00000577688 71 ntBASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 AC092118.2-201ENST00000613495 667 ntBASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 RNF165-205ENST00000588679 2904 ntBASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PRAMEF25A6NGN4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms