Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 FAM99A-202ENST00000538190 1989 ntBASIC19.22■□□□□ 0.67
CNOT1A5YKK6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 PVRIG2P-201ENST00000435460 978 ntBASIC19.21■□□□□ 0.67
CNOT1A5YKK6 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.21■□□□□ 0.67
CNOT1A5YKK6 AC111152.3-201ENST00000569699 673 ntBASIC19.21■□□□□ 0.67
CNOT1A5YKK6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CNOT1A5YKK6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
CNOT1A5YKK6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 TSPY21P-201ENST00000433481 731 ntBASIC19.2■□□□□ 0.66
CNOT1A5YKK6 AP000347.1-202ENST00000435868 847 ntBASIC19.2■□□□□ 0.66
CNOT1A5YKK6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 TSPY23P-201ENST00000440136 739 ntBASIC19.2■□□□□ 0.66
CNOT1A5YKK6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.2■□□□□ 0.66
CNOT1A5YKK6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT1A5YKK6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 C9orf163-202ENST00000624034 2573 ntBASIC19.19■□□□□ 0.66
CNOT1A5YKK6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT1A5YKK6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 AC128688.1-201ENST00000487626 519 ntBASIC19.18■□□□□ 0.66
CNOT1A5YKK6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms