Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
XIRP2A4UGR9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
XIRP2A4UGR9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
XIRP2A4UGR9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.02■□□□□ 0.95
XIRP2A4UGR9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 RNF152P1-201ENST00000397754 604 ntBASIC21.01■□□□□ 0.95
XIRP2A4UGR9 KRT18P16-201ENST00000510337 1294 ntBASIC21.01■□□□□ 0.95
XIRP2A4UGR9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.01■□□□□ 0.95
XIRP2A4UGR9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XIRP2A4UGR9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21■□□□□ 0.95
XIRP2A4UGR9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21■□□□□ 0.95
XIRP2A4UGR9 EGLN1P1-201ENST00000531623 762 ntBASIC21■□□□□ 0.95
XIRP2A4UGR9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21■□□□□ 0.95
XIRP2A4UGR9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21■□□□□ 0.95
XIRP2A4UGR9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
XIRP2A4UGR9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
XIRP2A4UGR9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
XIRP2A4UGR9 AC128688.1-201ENST00000487626 519 ntBASIC21■□□□□ 0.95
XIRP2A4UGR9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21■□□□□ 0.95
XIRP2A4UGR9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
XIRP2A4UGR9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21■□□□□ 0.95
XIRP2A4UGR9 AC069148.1-201ENST00000608741 768 ntBASIC21■□□□□ 0.95
XIRP2A4UGR9 AC130371.2-201ENST00000619443 611 ntBASIC21■□□□□ 0.95
XIRP2A4UGR9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
XIRP2A4UGR9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XIRP2A4UGR9 PCED1CP-201ENST00000419887 785 ntBASIC21■□□□□ 0.95
XIRP2A4UGR9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21■□□□□ 0.95
XIRP2A4UGR9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21■□□□□ 0.95
XIRP2A4UGR9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 DGCR10-201ENST00000609839 495 ntBASIC20.99■□□□□ 0.95
XIRP2A4UGR9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.99■□□□□ 0.95
XIRP2A4UGR9 AC127496.7-201ENST00000625110 1798 ntBASIC20.98■□□□□ 0.95
XIRP2A4UGR9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 AP002982.1-201ENST00000492365 877 ntBASIC20.98■□□□□ 0.95
XIRP2A4UGR9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 AL691432.3-201ENST00000621860 400 ntBASIC20.98■□□□□ 0.95
XIRP2A4UGR9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.98■□□□□ 0.95
XIRP2A4UGR9 IER3-202ENST00000376377 1350 ntBASIC20.98■□□□□ 0.95
XIRP2A4UGR9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XIRP2A4UGR9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XIRP2A4UGR9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
XIRP2A4UGR9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XIRP2A4UGR9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
XIRP2A4UGR9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
XIRP2A4UGR9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.97■□□□□ 0.95
XIRP2A4UGR9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.97■□□□□ 0.95
XIRP2A4UGR9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.97■□□□□ 0.95
XIRP2A4UGR9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XIRP2A4UGR9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms