Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 MIR939-201ENST00000401314 82 ntBASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 AC105265.2-201ENST00000467189 838 ntBASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 PBX2P1-201ENST00000493219 1291 ntBASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 KRT18P20-201ENST00000548986 1279 ntBASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 SLC7A5P2-201ENST00000553010 536 ntBASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 CCDC92B-201ENST00000575506 885 ntBASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV27A0A0K0K1C4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 LINC01465-201ENST00000408887 1940 ntBASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 RBM17P2-201ENST00000616397 1405 ntBASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 IRS3P-201ENST00000223076 1006 ntBASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 AC097381.1-201ENST00000429019 1296 ntBASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 AL032819.2-201ENST00000624543 2162 ntBASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV27A0A0K0K1C4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms