Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 AC063952.2-201ENST00000498792 1227 ntBASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC163A0A0D9SF12 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 AK4P3-201ENST00000418260 669 ntBASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 ECEL1P2-202ENST00000465689 757 ntBASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC163A0A0D9SF12 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 AC022616.7-201ENST00000525383 220 ntBASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC163A0A0D9SF12 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC163A0A0D9SF12 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC163A0A0D9SF12 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CCDC163A0A0D9SF12 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC163A0A0D9SF12 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC163A0A0D9SF12 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 AC097488.1-201ENST00000507834 756 ntBASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 AC131212.4-201ENST00000623606 975 ntBASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 KRT8P17-201ENST00000453110 1448 ntBASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC163A0A0D9SF12 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 C9orf163-202ENST00000624034 2573 ntBASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 FAM8A6P-201ENST00000407496 1135 ntBASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 HMGA1P5-201ENST00000412453 271 ntBASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 AC004980.1-204ENST00000429707 299 ntBASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 AC011506.1-201ENST00000474329 610 ntBASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms