Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 AC011484.1-201ENST00000377652 1995 ntBASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 KRT19P1-201ENST00000405746 1186 ntBASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 KRT18P14-201ENST00000534205 1250 ntBASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 AP001160.3-201ENST00000601484 763 ntBASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 AC104187.1-201ENST00000607510 612 ntBASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 AFG3L1P-217ENST00000557444 2447 ntBASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV8-4A0A0B4J246 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TRAV8-4A0A0B4J246 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV8-4A0A0B4J246 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV8-4A0A0B4J246 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.96□□□□□ -0.18
TRAV8-4A0A0B4J246 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV8-4A0A0B4J246 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV8-4A0A0B4J246 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.95□□□□□ -0.18
TRAV8-4A0A0B4J246 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 FEM1AP1-201ENST00000431297 1995 ntBASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 SLC7A5P1-201ENST00000568957 537 ntBASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-4A0A0B4J246 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV8-4A0A0B4J246 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV8-4A0A0B4J246 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV8-4A0A0B4J246 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV8-4A0A0B4J246 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms