Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SSX3Q99909 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SSX3Q99909 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SSX3Q99909 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX3Q99909 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX3Q99909 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 AP000766.1-201ENST00000561746 4140 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 SNORA30B-201ENST00000365319 129 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 SSX9-201ENST00000376909 591 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 AC226101.1-201ENST00000401483 387 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX3Q99909 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX3Q99909 AC099344.1-201ENST00000433548 492 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX3Q99909 SNX18P9-201ENST00000440580 835 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX3Q99909 RN7SL36P-201ENST00000469345 276 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 NDUFS5P2-201ENST00000484004 306 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX3Q99909 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX3Q99909 SUMO2P7-201ENST00000511179 285 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 MTND6P19-201ENST00000519399 524 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX3Q99909 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX3Q99909 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.2□□□□□ -1.42
SSX3Q99909 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
SSX3Q99909 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX3Q99909 MIR5192-201ENST00000579892 92 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX3Q99909 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX3Q99909 AC069499.2-201ENST00000610665 382 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 AC018558.4-201ENST00000622153 281 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 AC005383.1-201ENST00000622689 534 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 AL512356.3-201ENST00000623005 461 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX3Q99909 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX3Q99909 TMEM14EP-202ENST00000639378 1296 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 AC119674.1-221ENST00000641594 1213 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 AL161891.1-201ENST00000621575 4636 ntBASIC6.2□□□□□ -1.42
SSX3Q99909 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX3Q99909 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.2□□□□□ -1.42
SSX3Q99909 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX3Q99909 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SSX3Q99909 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX3Q99909 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 AC008957.3-201ENST00000624112 2242 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 HCFC2P1-201ENST00000392864 1592 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 AC020904.2-202ENST00000614660 1401 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX3Q99909 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 AL139327.1-201ENST00000382988 348 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 NHP2P2-201ENST00000396362 460 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 RN7SKP261-201ENST00000410948 278 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX3Q99909 AC009299.1-201ENST00000429684 717 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX3Q99909 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSX3Q99909 AL137074.1-201ENST00000442640 465 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 ARMC8P1-201ENST00000443069 1289 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 SCDP1-201ENST00000455244 1081 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX3Q99909 AC096922.1-201ENST00000461635 651 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX3Q99909 AC026254.2-201ENST00000475295 371 ntBASIC6.19□□□□□ -1.42
SSX3Q99909 AC135999.1-201ENST00000478962 479 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms