Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.47□□□□□ -1.05
RHBDL3P58872 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC8.47□□□□□ -1.05
RHBDL3P58872 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.47□□□□□ -1.05
RHBDL3P58872 RPL5P6-201ENST00000425640 886 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
RHBDL3P58872 AC083855.1-201ENST00000440041 258 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 UBQLN1P1-207ENST00000441056 1169 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC8.47□□□□□ -1.05
RHBDL3P58872 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.47□□□□□ -1.05
RHBDL3P58872 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
RHBDL3P58872 AC091304.4-201ENST00000565703 620 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 AC068408.1-201ENST00000577406 1144 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 AL137000.1-201ENST00000610528 1244 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 AC097641.3-201ENST00000613523 464 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.47□□□□□ -1.05
RHBDL3P58872 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.47□□□□□ -1.05
RHBDL3P58872 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 SAMMSON-222ENST00000641901 2727 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 AL353807.3-201ENST00000500626 2505 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.47□□□□□ -1.05
RHBDL3P58872 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RHBDL3P58872 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
RHBDL3P58872 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RHBDL3P58872 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.46□□□□□ -1.05
RHBDL3P58872 OR2AH1P-202ENST00000641232 2744 ntBASIC8.46□□□□□ -1.05
RHBDL3P58872 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
RHBDL3P58872 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
RHBDL3P58872 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.46□□□□□ -1.05
RHBDL3P58872 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC8.46□□□□□ -1.05
RHBDL3P58872 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RHBDL3P58872 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.46□□□□□ -1.05
RHBDL3P58872 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RHBDL3P58872 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
RHBDL3P58872 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
RHBDL3P58872 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
RHBDL3P58872 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 AL355375.1-201ENST00000405686 392 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.46□□□□□ -1.06
RHBDL3P58872 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.46□□□□□ -1.06
RHBDL3P58872 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.46□□□□□ -1.06
RHBDL3P58872 AL672212.1-201ENST00000422246 400 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 ANKRD54P1-201ENST00000433115 471 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 AC064862.5-201ENST00000440618 334 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC8.46□□□□□ -1.06
RHBDL3P58872 AC066616.1-201ENST00000486795 413 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 AC092349.1-201ENST00000504903 310 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 AC024451.1-201ENST00000508013 779 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8.46□□□□□ -1.06
RHBDL3P58872 SCARNA6-201ENST00000515982 265 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC8.46□□□□□ -1.06
RHBDL3P58872 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
RHBDL3P58872 AC013283.1-201ENST00000557282 492 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC8.46□□□□□ -1.06
RHBDL3P58872 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC8.46□□□□□ -1.06
RHBDL3P58872 MIR4312-201ENST00000579909 76 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.46□□□□□ -1.06
RHBDL3P58872 AC063962.1-201ENST00000608199 521 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.46□□□□□ -1.06
RHBDL3P58872 OR8A1-204ENST00000642111 1145 ntBASIC8.46□□□□□ -1.06
RHBDL3P58872 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.46□□□□□ -1.06
RHBDL3P58872 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.46□□□□□ -1.06
RHBDL3P58872 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.46□□□□□ -1.06
RHBDL3P58872 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.46□□□□□ -1.06
RHBDL3P58872 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RHBDL3P58872 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.45□□□□□ -1.06
RHBDL3P58872 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
RHBDL3P58872 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.45□□□□□ -1.06
RHBDL3P58872 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RHBDL3P58872 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RHBDL3P58872 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.45□□□□□ -1.06
RHBDL3P58872 AC092634.1-201ENST00000366505 199 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.45□□□□□ -1.06
RHBDL3P58872 RPL24P7-201ENST00000399435 453 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms