Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
COL15A1P39059 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
COL15A1P39059 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.96□□□□□ -0.97
COL15A1P39059 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
COL15A1P39059 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC8.96□□□□□ -0.98
COL15A1P39059 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
COL15A1P39059 SAMMSON-222ENST00000641901 2727 ntBASIC8.96□□□□□ -0.98
COL15A1P39059 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
COL15A1P39059 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
COL15A1P39059 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.96□□□□□ -0.98
COL15A1P39059 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
COL15A1P39059 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
COL15A1P39059 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.96□□□□□ -0.98
COL15A1P39059 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
COL15A1P39059 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
COL15A1P39059 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
COL15A1P39059 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.96□□□□□ -0.98
COL15A1P39059 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.96□□□□□ -0.98
COL15A1P39059 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
COL15A1P39059 AL121578.2-201ENST00000448797 447 ntBASIC8.96□□□□□ -0.98
COL15A1P39059 RN7SL160P-201ENST00000468558 284 ntBASIC8.96□□□□□ -0.98
COL15A1P39059 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC8.96□□□□□ -0.98
COL15A1P39059 AC146944.3-201ENST00000509969 371 ntBASIC8.96□□□□□ -0.98
COL15A1P39059 GUSBP9-201ENST00000510138 584 ntBASIC8.96□□□□□ -0.98
COL15A1P39059 MTCYBP44-201ENST00000514835 823 ntBASIC8.96□□□□□ -0.98
COL15A1P39059 AC027801.3-201ENST00000515049 698 ntBASIC8.96□□□□□ -0.98
COL15A1P39059 AC010442.1-201ENST00000515583 816 ntBASIC8.96□□□□□ -0.98
COL15A1P39059 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.96□□□□□ -0.98
COL15A1P39059 OR9G2P-201ENST00000533326 880 ntBASIC8.96□□□□□ -0.98
COL15A1P39059 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.96□□□□□ -0.98
COL15A1P39059 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC8.96□□□□□ -0.98
COL15A1P39059 MIR212-201ENST00000586026 110 ntBASIC8.96□□□□□ -0.98
COL15A1P39059 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC8.96□□□□□ -0.98
COL15A1P39059 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC8.96□□□□□ -0.98
COL15A1P39059 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.96□□□□□ -0.98
COL15A1P39059 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.96□□□□□ -0.98
COL15A1P39059 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
COL15A1P39059 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.96□□□□□ -0.98
COL15A1P39059 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
COL15A1P39059 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.96□□□□□ -0.98
COL15A1P39059 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.95□□□□□ -0.98
COL15A1P39059 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 AC245060.6-201ENST00000624350 8420 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.95□□□□□ -0.98
COL15A1P39059 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 Z97832.2-201ENST00000605896 4261 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
COL15A1P39059 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
COL15A1P39059 RN7SKP189-201ENST00000365042 330 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 AC019178.1-201ENST00000392337 440 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.95□□□□□ -0.98
COL15A1P39059 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC8.95□□□□□ -0.98
COL15A1P39059 AC245291.3-201ENST00000443400 292 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 OR51P1P-201ENST00000447547 942 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 RN7SL390P-201ENST00000470634 284 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 AP000805.1-201ENST00000471604 784 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 AP005202.1-201ENST00000489915 867 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC8.95□□□□□ -0.98
COL15A1P39059 OR4A1P-201ENST00000532342 920 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.95□□□□□ -0.98
COL15A1P39059 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.95□□□□□ -0.98
COL15A1P39059 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 NDUFB9P1-201ENST00000604683 510 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.95□□□□□ -0.98
COL15A1P39059 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
COL15A1P39059 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
COL15A1P39059 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
COL15A1P39059 MALAT1-202ENST00000534336 8708 ntBASIC8.95□□□□□ -0.98
COL15A1P39059 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.95□□□□□ -0.98
COL15A1P39059 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
COL15A1P39059 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
COL15A1P39059 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
COL15A1P39059 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
COL15A1P39059 AC015871.4-201ENST00000624650 2260 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
COL15A1P39059 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
COL15A1P39059 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 KARSP2-201ENST00000415696 1639 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms