Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 AL359922.2-201ENST00000581788 3017 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
ERCC3P19447 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
ERCC3P19447 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.91□□□□□ -0.98
ERCC3P19447 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.91□□□□□ -0.98
ERCC3P19447 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.91□□□□□ -0.98
ERCC3P19447 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.91□□□□□ -0.98
ERCC3P19447 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
ERCC3P19447 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 FHL1-203ENST00000370676 833 ntTSL 5 BASIC8.91□□□□□ -0.98
ERCC3P19447 SNORD15A-201ENST00000384214 148 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 YWHAZP3-201ENST00000415292 738 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 EEF1A1P34-201ENST00000419888 1267 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
ERCC3P19447 RPL6P2-201ENST00000425480 783 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 MORF4L1P7-201ENST00000426038 703 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 MTND1P10-201ENST00000426108 832 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.91□□□□□ -0.98
ERCC3P19447 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.91□□□□□ -0.98
ERCC3P19447 NDUFB4P1-201ENST00000462398 381 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 RN7SL635P-201ENST00000492123 296 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 TRAV31-201ENST00000502780 342 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 AC098862.1-201ENST00000504991 413 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 AC017007.1-201ENST00000511960 415 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 MTCO3P27-201ENST00000514397 196 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 AC067904.2-201ENST00000517322 1283 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC8.91□□□□□ -0.98
ERCC3P19447 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
ERCC3P19447 AC006065.2-201ENST00000536978 211 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.91□□□□□ -0.98
ERCC3P19447 AC093014.1-201ENST00000548926 724 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 NOP56P3-201ENST00000549457 385 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.91□□□□□ -0.98
ERCC3P19447 AL132640.2-202ENST00000559732 614 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 AL049838.1-201ENST00000563647 981 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.91□□□□□ -0.98
ERCC3P19447 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC8.91□□□□□ -0.98
ERCC3P19447 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC8.91□□□□□ -0.98
ERCC3P19447 AL158151.4-201ENST00000600965 507 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC8.91□□□□□ -0.98
ERCC3P19447 PTCHD3P1-201ENST00000612350 537 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.91□□□□□ -0.98
ERCC3P19447 OR6C71P-202ENST00000641886 1107 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 AL162171.3-201ENST00000617439 3178 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.91□□□□□ -0.98
ERCC3P19447 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 OR10AB1P-202ENST00000641219 1686 ntBASIC8.91□□□□□ -0.98
ERCC3P19447 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ERCC3P19447 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
ERCC3P19447 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
ERCC3P19447 TCP1P3-201ENST00000414406 1498 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.98
ERCC3P19447 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8.9□□□□□ -0.98
ERCC3P19447 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.9□□□□□ -0.98
ERCC3P19447 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 AC010886.1-201ENST00000437380 2869 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC8.9□□□□□ -0.98
ERCC3P19447 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
ERCC3P19447 MIR16-2-201ENST00000362117 81 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 MIR27A-201ENST00000385073 78 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 TERF1P4-201ENST00000399580 1115 ntBASIC8.9□□□□□ -0.98
ERCC3P19447 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ERCC3P19447 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC8.9□□□□□ -0.98
ERCC3P19447 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC8.9□□□□□ -0.98
ERCC3P19447 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.9□□□□□ -0.98
ERCC3P19447 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.9□□□□□ -0.98
ERCC3P19447 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
ERCC3P19447 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
ERCC3P19447 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC8.9□□□□□ -0.98
ERCC3P19447 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC8.9□□□□□ -0.98
ERCC3P19447 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.9□□□□□ -0.98
ERCC3P19447 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC8.9□□□□□ -0.98
ERCC3P19447 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms