Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 BMS1P11-201ENST00000442351 885 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 MTND4LP12-201ENST00000448237 295 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 CEACAMP11-201ENST00000455211 583 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 YRDCP3-201ENST00000456507 480 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 BMS1P9-201ENST00000457640 885 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 UOX-201ENST00000471089 899 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.49□□□□□ -1.05
RHBDL3P58872 AC026774.2-201ENST00000513990 1098 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.49□□□□□ -1.05
RHBDL3P58872 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.49□□□□□ -1.05
RHBDL3P58872 AL132640.1-201ENST00000559594 619 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.49□□□□□ -1.05
RHBDL3P58872 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.49□□□□□ -1.05
RHBDL3P58872 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC8.49□□□□□ -1.05
RHBDL3P58872 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC8.49□□□□□ -1.05
RHBDL3P58872 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC8.49□□□□□ -1.05
RHBDL3P58872 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.49□□□□□ -1.05
RHBDL3P58872 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.49□□□□□ -1.05
RHBDL3P58872 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
RHBDL3P58872 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.49□□□□□ -1.05
RHBDL3P58872 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
RHBDL3P58872 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.49□□□□□ -1.05
RHBDL3P58872 AL080317.3-201ENST00000607434 4315 ntBASIC8.49□□□□□ -1.05
RHBDL3P58872 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RHBDL3P58872 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.49□□□□□ -1.05
RHBDL3P58872 TRIM53CP-201ENST00000531490 1354 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
RHBDL3P58872 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC087501.5-201ENST00000607496 2374 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
RHBDL3P58872 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RHBDL3P58872 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RHBDL3P58872 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC8.48□□□□□ -1.05
RHBDL3P58872 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.48□□□□□ -1.05
RHBDL3P58872 RN7SKP91-201ENST00000410852 288 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 AC009518.3-201ENST00000438972 253 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC234771.3-201ENST00000454984 622 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 RPS4XP17-201ENST00000479057 754 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 RN7SL797P-201ENST00000486314 297 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 RN7SL350P-201ENST00000492591 299 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.48□□□□□ -1.05
RHBDL3P58872 PGAM4P2-201ENST00000512491 721 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC068802.1-201ENST00000603420 732 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 AL355333.1-201ENST00000605632 279 ntBASIC8.48□□□□□ -1.05
RHBDL3P58872 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RHBDL3P58872 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RHBDL3P58872 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
RHBDL3P58872 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RHBDL3P58872 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RHBDL3P58872 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RHBDL3P58872 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
RHBDL3P58872 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
RHBDL3P58872 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 AL590004.4-201ENST00000566733 7060 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 AC139426.3-201ENST00000605648 2059 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.47□□□□□ -1.05
RHBDL3P58872 AP003972.1-201ENST00000625192 5446 ntBASIC8.47□□□□□ -1.05
RHBDL3P58872 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
RHBDL3P58872 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.47□□□□□ -1.05
RHBDL3P58872 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RHBDL3P58872 RNA5SP176-201ENST00000390956 110 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms