Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL4A5P29400 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL4A5P29400 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL4A5P29400 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL4A5P29400 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
COL4A5P29400 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL4A5P29400 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL4A5P29400 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
COL4A5P29400 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC8.26□□□□□ -1.09
COL4A5P29400 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
COL4A5P29400 AL359694.1-201ENST00000403247 604 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 AC108479.1-201ENST00000431142 427 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC8.26□□□□□ -1.09
COL4A5P29400 GAPDHP33-201ENST00000443168 1013 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 AL359839.1-201ENST00000451975 1160 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 AC096922.1-201ENST00000461635 651 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.26□□□□□ -1.09
COL4A5P29400 AC093719.1-201ENST00000480427 441 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC8.26□□□□□ -1.09
COL4A5P29400 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.26□□□□□ -1.09
COL4A5P29400 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC8.26□□□□□ -1.09
COL4A5P29400 AL445383.1-201ENST00000554689 874 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.26□□□□□ -1.09
COL4A5P29400 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC8.26□□□□□ -1.09
COL4A5P29400 AC007255.2-201ENST00000604053 631 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 AP000894.4-201ENST00000610185 483 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.26□□□□□ -1.09
COL4A5P29400 AL109924.4-201ENST00000623089 670 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 SNX18P12-201ENST00000624821 759 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
COL4A5P29400 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.26□□□□□ -1.09
COL4A5P29400 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL4A5P29400 MAPK10-379ENST00000642013 1385 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 TNFSF15-201ENST00000374044 2789 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.26□□□□□ -1.09
COL4A5P29400 MON2-214ENST00000641654 10382 ntBASIC8.26□□□□□ -1.09
COL4A5P29400 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.26□□□□□ -1.09
COL4A5P29400 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL4A5P29400 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL4A5P29400 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
COL4A5P29400 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
COL4A5P29400 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 SNORA70.3-201ENST00000365075 132 ntBASIC8.25□□□□□ -1.09
COL4A5P29400 PSMA6P1-201ENST00000400275 741 ntBASIC8.25□□□□□ -1.09
COL4A5P29400 LYPLA1P3-201ENST00000402650 695 ntBASIC8.25□□□□□ -1.09
COL4A5P29400 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC8.25□□□□□ -1.09
COL4A5P29400 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC8.25□□□□□ -1.09
COL4A5P29400 RPL26P30-201ENST00000453533 435 ntBASIC8.25□□□□□ -1.09
COL4A5P29400 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
COL4A5P29400 AC018645.1-201ENST00000505003 109 ntBASIC8.25□□□□□ -1.09
COL4A5P29400 AL133399.1-201ENST00000527476 298 ntBASIC8.25□□□□□ -1.09
COL4A5P29400 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.25□□□□□ -1.09
COL4A5P29400 MIR4502-201ENST00000580432 81 ntBASIC8.25□□□□□ -1.09
COL4A5P29400 IGKV2OR2-1-201ENST00000605129 304 ntBASIC8.25□□□□□ -1.09
COL4A5P29400 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.25□□□□□ -1.09
COL4A5P29400 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
COL4A5P29400 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.25□□□□□ -1.09
COL4A5P29400 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.25□□□□□ -1.09
COL4A5P29400 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.25□□□□□ -1.09
COL4A5P29400 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL4A5P29400 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.25□□□□□ -1.09
COL4A5P29400 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL4A5P29400 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL4A5P29400 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL4A5P29400 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
COL4A5P29400 RN7SKP78-201ENST00000364711 318 ntBASIC8.24□□□□□ -1.09
COL4A5P29400 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
COL4A5P29400 SMARCE1P6-201ENST00000398372 1216 ntBASIC8.24□□□□□ -1.09
COL4A5P29400 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.24□□□□□ -1.09
COL4A5P29400 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL4A5P29400 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC8.24□□□□□ -1.09
COL4A5P29400 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.24□□□□□ -1.09
COL4A5P29400 AC069154.1-201ENST00000432914 542 ntBASIC8.24□□□□□ -1.09
COL4A5P29400 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL4A5P29400 RN7SL221P-201ENST00000466190 281 ntBASIC8.24□□□□□ -1.09
COL4A5P29400 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.24□□□□□ -1.09
COL4A5P29400 AC146944.3-201ENST00000509969 371 ntBASIC8.24□□□□□ -1.09
COL4A5P29400 AP005597.2-201ENST00000526238 341 ntBASIC8.24□□□□□ -1.09
COL4A5P29400 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC8.24□□□□□ -1.09
COL4A5P29400 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.24□□□□□ -1.09
COL4A5P29400 AC002310.3-201ENST00000569728 723 ntBASIC8.24□□□□□ -1.09
COL4A5P29400 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.24□□□□□ -1.09
COL4A5P29400 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.24□□□□□ -1.09
COL4A5P29400 AC108865.2-201ENST00000606881 432 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms