Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC8.93□□□□□ -0.98
ERCC3P19447 UBE2V1P12-201ENST00000503954 474 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC8.93□□□□□ -0.98
ERCC3P19447 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC8.93□□□□□ -0.98
ERCC3P19447 ATP5J2P4-201ENST00000538774 267 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 AC008147.3-201ENST00000548666 354 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 COX6CP11-201ENST00000555293 229 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
ERCC3P19447 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.93□□□□□ -0.98
ERCC3P19447 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.93□□□□□ -0.98
ERCC3P19447 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.93□□□□□ -0.98
ERCC3P19447 AC013244.3-201ENST00000605614 388 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 7SK.12-201ENST00000612820 244 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 AL390882.1-201ENST00000618821 594 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 AC016542.3-201ENST00000623520 619 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 AC068787.1-201ENST00000623908 691 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 AC013437.2-201ENST00000639587 677 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 EEF1A1P4-201ENST00000359165 1405 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 AL355974.1-201ENST00000618896 1708 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 AC016930.1-201ENST00000468766 2205 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.93□□□□□ -0.98
ERCC3P19447 CTAGE3P-201ENST00000454280 2404 ntBASIC8.93□□□□□ -0.98
ERCC3P19447 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.93□□□□□ -0.98
ERCC3P19447 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ERCC3P19447 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.92□□□□□ -0.98
ERCC3P19447 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.92□□□□□ -0.98
ERCC3P19447 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC8.92□□□□□ -0.98
ERCC3P19447 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 AL080317.3-201ENST00000607434 4315 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.92□□□□□ -0.98
ERCC3P19447 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
ERCC3P19447 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
ERCC3P19447 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 MTCYBP15-201ENST00000433123 1127 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 NIP7P1-201ENST00000433227 512 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 RAB9AP5-201ENST00000437794 597 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 RAB9AP2-201ENST00000443911 597 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC8.92□□□□□ -0.98
ERCC3P19447 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
ERCC3P19447 EIF4E2P2-201ENST00000492033 736 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 SOX5P1-201ENST00000524155 1127 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC8.92□□□□□ -0.98
ERCC3P19447 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC8.92□□□□□ -0.98
ERCC3P19447 GLRXP2-201ENST00000555594 321 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC8.92□□□□□ -0.98
ERCC3P19447 DNM1P31-201ENST00000564149 696 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.92□□□□□ -0.98
ERCC3P19447 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC8.92□□□□□ -0.98
ERCC3P19447 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC8.92□□□□□ -0.98
ERCC3P19447 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 AP000864.1-201ENST00000609424 650 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
ERCC3P19447 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 AC073342.3-201ENST00000624211 193 ntBASIC8.92□□□□□ -0.98
ERCC3P19447 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.92□□□□□ -0.98
ERCC3P19447 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ERCC3P19447 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.92□□□□□ -0.98
ERCC3P19447 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
ERCC3P19447 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
ERCC3P19447 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC8.92□□□□□ -0.98
ERCC3P19447 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.92□□□□□ -0.98
ERCC3P19447 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms