Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC015818.6-201ENST00000584274 634 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC068802.1-201ENST00000603420 732 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC008626.1-201ENST00000604384 255 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC023513.1-201ENST00000604396 691 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AL136304.1-201ENST00000607790 509 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC012488.1-201ENST00000611221 640 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC103974.2-201ENST00000611319 778 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC097641.3-201ENST00000613523 464 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AC239600.2-201ENST00000619615 1165 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 AL354702.2-202ENST00000641481 890 ntBASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71LQ8N9Z2 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC022507.1-201ENST00000548349 1505 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 RNU6-1017P-201ENST00000363613 106 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 GNAI2P2-201ENST00000417003 916 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 EEF1A1P34-201ENST00000419888 1267 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 FDPSP1-201ENST00000424976 1071 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 LDHAP2-201ENST00000437325 985 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 HMGN1P6-201ENST00000438508 291 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 RPL4P2-201ENST00000447259 1282 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AL451063.1-201ENST00000450164 1133 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC002075.1-201ENST00000457396 676 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC117395.2-201ENST00000463122 1128 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 RN7SL160P-201ENST00000468558 284 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC139713.1-202ENST00000512366 460 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 SNORA70.23-201ENST00000517218 151 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 IGHVII-22-1-201ENST00000517888 265 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AP003385.2-201ENST00000524910 973 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC026111.1-201ENST00000551090 1195 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 HNRNPA1P71-201ENST00000559135 950 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 DNM1P31-201ENST00000564149 696 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 CDH13-207ENST00000565636 810 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AL109918.2-201ENST00000605188 279 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AL356052.1-201ENST00000605764 376 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AL157762.1-201ENST00000619612 415 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC005383.1-201ENST00000622689 534 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 CU638689.2-201ENST00000623809 818 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC137056.2-201ENST00000624055 1958 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 OFD1P17-201ENST00000437639 3018 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC016251.2-201ENST00000623393 3089 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 AC119674.1-204ENST00000641348 1343 ntBASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC71LQ8N9Z2 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms