Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 RN7SKP91-201ENST00000410852 288 ntBASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC068138.1-201ENST00000412635 217 ntBASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 SNRPEP5-201ENST00000425442 278 ntBASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 RN7SL751P-201ENST00000473281 284 ntBASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AL591122.1-201ENST00000487348 492 ntBASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 RN7SKP11-201ENST00000517018 287 ntBASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC009779.8-202ENST00000607990 932 ntBASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC087821.1-201ENST00000623639 567 ntBASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AL356361.1-201ENST00000400943 1459 ntBASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM71Q2Q1W2 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 RNA5SP472-201ENST00000363868 119 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AP003385.1-201ENST00000426387 893 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AC104698.1-201ENST00000435671 276 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AC234771.4-201ENST00000441416 730 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 IGKV3D-31-201ENST00000519131 281 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 MTND2P7-201ENST00000521337 640 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 IGLVI-42-201ENST00000522485 381 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AC010287.1-201ENST00000566916 357 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 MIR4312-201ENST00000579909 76 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AL137000.1-201ENST00000610528 1244 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 TMEM14EP-202ENST00000639378 1296 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 NR1H5P-201ENST00000452683 1377 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 HSPD1P4-201ENST00000547203 1702 ntBASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM71Q2Q1W2 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms