Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 MELK-208ENST00000536987 2125 ntTSL 2 BASIC9□□□□□ -0.97
COL15A1P39059 FANCD2P2-201ENST00000437591 1400 ntBASIC9□□□□□ -0.97
COL15A1P39059 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC9□□□□□ -0.97
COL15A1P39059 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
COL15A1P39059 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
COL15A1P39059 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
COL15A1P39059 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
COL15A1P39059 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
COL15A1P39059 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
COL15A1P39059 RN7SKP250-201ENST00000363924 321 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 FAM204BP-201ENST00000369171 701 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 RPL5P5-201ENST00000392009 893 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC8.99□□□□□ -0.97
COL15A1P39059 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC8.99□□□□□ -0.97
COL15A1P39059 RPL5P34-201ENST00000426545 891 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 ETF1P1-206ENST00000427296 984 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 AC010086.1-201ENST00000437359 1052 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.99□□□□□ -0.97
COL15A1P39059 RPL5P9-201ENST00000448118 886 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 RPL7AP71-201ENST00000451120 739 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC8.99□□□□□ -0.97
COL15A1P39059 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC8.99□□□□□ -0.97
COL15A1P39059 OR5BK1P-201ENST00000550421 823 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.99□□□□□ -0.97
COL15A1P39059 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
COL15A1P39059 MIR378C-201ENST00000578683 81 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 WBP1LP11-201ENST00000586141 328 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.99□□□□□ -0.97
COL15A1P39059 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC8.99□□□□□ -0.97
COL15A1P39059 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
COL15A1P39059 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
COL15A1P39059 AC061975.5-201ENST00000584928 1441 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
COL15A1P39059 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.99□□□□□ -0.97
COL15A1P39059 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 AC018992.1-201ENST00000523778 2149 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.99□□□□□ -0.97
COL15A1P39059 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.99□□□□□ -0.97
COL15A1P39059 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.99□□□□□ -0.97
COL15A1P39059 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.99□□□□□ -0.97
COL15A1P39059 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
COL15A1P39059 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.99□□□□□ -0.97
COL15A1P39059 RN7SKP188-201ENST00000410789 317 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 ATP5BP1-201ENST00000411980 1574 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.99□□□□□ -0.97
COL15A1P39059 UQCRHP1-204ENST00000424609 274 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 GAPDHP19-201ENST00000431768 1005 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC8.99□□□□□ -0.97
COL15A1P39059 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC8.99□□□□□ -0.97
COL15A1P39059 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.99□□□□□ -0.97
COL15A1P39059 RN7SL870P-201ENST00000460111 296 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 AC015524.1-201ENST00000491585 472 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 PGAM4P2-201ENST00000512491 721 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 SCARNA6-201ENST00000515982 265 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 AC115837.1-201ENST00000517662 1001 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 AC120036.3-201ENST00000517826 292 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 IGKV2D-38-201ENST00000518423 240 ntBASIC8.99□□□□□ -0.97
COL15A1P39059 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC8.99□□□□□ -0.97
COL15A1P39059 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.99□□□□□ -0.97
COL15A1P39059 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
COL15A1P39059 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms