Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC074029.3-201ENST00000618623 312 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AL139220.2-211ENST00000628234 754 ntTSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 MIR193BHG-210ENST00000641327 515 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AL596275.2-203ENST00000641951 371 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AL161901.1-201ENST00000624954 3425 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 EEF1A1P5-201ENST00000436459 1389 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 WNK1-220ENST00000574564 1401 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 MFSD8-243ENST00000641695 1455 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 Z95114.1-201ENST00000624264 14574 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 VN2R17P-201ENST00000391712 832 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 CNN3P1-201ENST00000401596 935 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 OR13D3P-201ENST00000412501 937 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 NONOP2-201ENST00000414613 1231 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 CDKN2AIPNLP3-201ENST00000418361 309 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 RPL5P28-201ENST00000418634 693 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 RPL4P4-201ENST00000422486 1284 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 GAS5-211ENST00000432536 959 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 DNAJC19P5-201ENST00000443295 316 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC104772.1-201ENST00000444764 862 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 RN7SL325P-201ENST00000460434 283 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AL355076.1-201ENST00000484315 270 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 OR51A1P-201ENST00000511110 946 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 POLB-211ENST00000521492 786 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 SNX18P27-201ENST00000523611 779 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 PSMA3-AS1-210ENST00000556002 1039 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC233699.1-201ENST00000569955 1168 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 RN7SL49P-201ENST00000581392 298 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 RPL23AP90-201ENST00000603820 236 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 TTR-204ENST00000610404 1040 ntTSL 5 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 TTR-205ENST00000613781 556 ntTSL 5 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC099654.4-201ENST00000614168 1059 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC005899.7-201ENST00000618199 588 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC073862.4-201ENST00000622982 854 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC073862.2-201ENST00000625114 701 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC084879.1-201ENST00000636165 1201 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC233280.20-201ENST00000637412 416 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC090643.1-201ENST00000623600 3100 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 AC015871.3-201ENST00000618835 2261 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 DOCK11P1-201ENST00000553480 5932 ntBASIC5.37□□□□□ -1.55
AP1S3Q96PC3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AP1S3Q96PC3 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms