Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 KRT18P52-201ENST00000404956 846 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC093107.1-201ENST00000422772 609 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 EIF4A1P10-201ENST00000428832 1216 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 ATP5LP4-201ENST00000434169 307 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 GCNT1P5-201ENST00000449274 682 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 TCEAL4P1-201ENST00000453620 588 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC018475.1-201ENST00000478358 465 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 RN7SL549P-201ENST00000478997 282 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC010625.1-201ENST00000511296 403 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 DCN-207ENST00000546370 586 ntTSL 3 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC011611.6-201ENST00000547483 255 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC068790.6-201ENST00000602558 258 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC027334.1-201ENST00000603257 310 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC140658.6-201ENST00000603958 201 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC087623.4-201ENST00000606593 695 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC004492.1-201ENST00000607036 742 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AP000864.1-201ENST00000609424 650 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AL357153.4-201ENST00000620487 1016 ntBASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 IL15-207ENST00000514653 1388 ntTSL 5 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC8.21□□□□□ -1.1
SHKBP1Q8TBC3 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 ERG-206ENST00000398911 4914 ntTSL 5 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 TRAF6P1-201ENST00000429404 1558 ntBASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 OR9K2-201ENST00000305377 1122 ntBASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 RNA5SP389-201ENST00000362610 115 ntBASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 RNA5SP226-201ENST00000362653 115 ntBASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 HMGB3P1-201ENST00000393368 573 ntBASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 AC092952.1-201ENST00000397646 1209 ntBASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 OFD1P11Y-201ENST00000418213 1177 ntBASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 AC090960.1-201ENST00000421072 306 ntBASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 UBE2D3P3-201ENST00000426992 425 ntBASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 GTF3AP6-201ENST00000432585 986 ntBASIC8.2□□□□□ -1.1
SHKBP1Q8TBC3 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms