Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL136380.2-201ENST00000411837 492 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 ST13P13-201ENST00000417082 1092 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 ATP5G1P5-201ENST00000429024 411 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 FTH1P20-201ENST00000434913 548 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AL356277.3-202ENST00000436672 587 ntTSL 3 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC006463.1-201ENST00000445929 232 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 MTCYBP1-201ENST00000454315 1119 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC018892.2-201ENST00000457656 693 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 RPL21P18-201ENST00000469899 480 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 RN7SL77P-201ENST00000473332 294 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC027343.3-201ENST00000504494 564 ntTSL 4 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC107074.1-201ENST00000513617 764 ntTSL 3 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 RNU2-30P-201ENST00000516209 141 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 ACTBP6-201ENST00000520036 1090 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 OR1D4-201ENST00000525719 939 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 OR4A13P-201ENST00000529316 942 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 EIF4EBP1P1-201ENST00000557776 341 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 OR1D5-201ENST00000575751 939 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AL157931.1-201ENST00000575845 585 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 CBX3P2-202ENST00000583365 535 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 RSL24D1P11-201ENST00000591045 491 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC100767.2-201ENST00000604840 693 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC009686.2-201ENST00000607017 577 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC093673.2-201ENST00000609674 331 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC024559.2-202ENST00000615240 529 ntTSL 5 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 OR1B1-201ENST00000623530 995 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC127071.1-201ENST00000624997 712 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 PCAT14-203ENST00000629869 976 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AC090897.3-201ENST00000636973 1157 ntBASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
FOXR1Q6PIV2 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 USP17L21-202ENST00000621388 1677 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
FOXR1Q6PIV2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 ST7-213ENST00000432298 1956 ntTSL 2 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 AL035555.1-201ENST00000404462 1790 ntBASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 ZNF610-209ENST00000616431 1772 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 MIR637-201ENST00000385000 99 ntBASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 RPS12P16-201ENST00000399739 407 ntBASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 NUP35P2-201ENST00000416748 943 ntBASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 RPL7P30-201ENST00000420888 709 ntBASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 GLUD1P9-201ENST00000420997 1173 ntBASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 MTCO3P1-205ENST00000422088 832 ntBASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 AC152007.1-201ENST00000428521 224 ntBASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 KRT18P53-201ENST00000431919 117 ntBASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC8.64□□□□□ -1.03
FOXR1Q6PIV2 AC091862.1-201ENST00000438016 1100 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms