Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SLC20A1P2-201ENST00000618036 966 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC011297.1-201ENST00000620503 2110 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 AL445665.1-201ENST00000322495 2599 ntTSL 2 BASIC9.41□□□□□ -0.9
ALDH1A1P00352 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 TCTN3-203ENST00000371217 2514 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AL591222.1-201ENST00000568063 3844 ntBASIC9.41□□□□□ -0.9
ALDH1A1P00352 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 AC092652.3-201ENST00000473426 1517 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALDH1A1P00352 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC013391.3-201ENST00000567484 1456 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AL353583.1-201ENST00000624195 1855 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 ABCG1-204ENST00000398437 3475 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 NFYA-201ENST00000341376 3811 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC109347.1-201ENST00000562919 2036 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 OR56A4-201ENST00000330728 1209 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 RN7SKP28-201ENST00000364770 305 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 Y_RNA.516-201ENST00000384541 124 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 RNU6-1011P-201ENST00000384668 107 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 OOSP1-201ENST00000398992 1270 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 AL008987.1-201ENST00000415528 237 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 MTND4P24-201ENST00000424002 397 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AL513321.1-201ENST00000441175 761 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 GTF2IP14-201ENST00000441415 586 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 PTGES3P5-201ENST00000455109 434 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC073896.2-201ENST00000549565 399 ntTSL 2 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 RN7SL14P-201ENST00000579715 298 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 Metazoa_SRP.136-201ENST00000614846 283 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 AL353898.2-201ENST00000623000 255 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 AC093875.1-201ENST00000623688 504 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 ZNF969P-201ENST00000510345 2341 ntBASIC9.4□□□□□ -0.9
ALDH1A1P00352 SLAMF7-203ENST00000368043 2689 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 LAMB4-203ENST00000418464 2600 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALDH1A1P00352 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC9.4□□□□□ -0.9
ALDH1A1P00352 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC9.4□□□□□ -0.91
ALDH1A1P00352 STPG1-203ENST00000374409 2804 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
ALDH1A1P00352 MAPK10-313ENST00000641405 2469 ntBASIC9.4□□□□□ -0.91
ALDH1A1P00352 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
ALDH1A1P00352 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
ALDH1A1P00352 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
ALDH1A1P00352 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC9.4□□□□□ -0.91
ALDH1A1P00352 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
ALDH1A1P00352 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
ALDH1A1P00352 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALDH1A1P00352 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC9.39□□□□□ -0.91
ALDH1A1P00352 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC9.39□□□□□ -0.91
ALDH1A1P00352 NOS2-202ENST00000621962 3345 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
ALDH1A1P00352 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC9.39□□□□□ -0.91
ALDH1A1P00352 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALDH1A1P00352 MOV10L1-209ENST00000540615 3941 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
ALDH1A1P00352 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
ALDH1A1P00352 RBM22-201ENST00000199814 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALDH1A1P00352 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALDH1A1P00352 AC093844.1-201ENST00000514910 1361 ntBASIC9.39□□□□□ -0.91
ALDH1A1P00352 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC9.39□□□□□ -0.91
ALDH1A1P00352 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALDH1A1P00352 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALDH1A1P00352 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
ALDH1A1P00352 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC9.39□□□□□ -0.91
ALDH1A1P00352 HCG18-242ENST00000602319 3342 ntBASIC9.39□□□□□ -0.91
ALDH1A1P00352 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC9.39□□□□□ -0.91
ALDH1A1P00352 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALDH1A1P00352 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
ALDH1A1P00352 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
ALDH1A1P00352 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALDH1A1P00352 RNU6-670P-201ENST00000364312 104 ntBASIC9.39□□□□□ -0.91
ALDH1A1P00352 RNA5SP302-201ENST00000364896 100 ntBASIC9.39□□□□□ -0.91
ALDH1A1P00352 PKMP3-201ENST00000405497 715 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms