Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
HMG20BQ9P0W2 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.81□□□□□ -1
HMG20BQ9P0W2 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 OR2A20P-201ENST00000479887 2913 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 RNA5SP218-201ENST00000363188 109 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 FAUP2-201ENST00000394301 401 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 AL354794.2-201ENST00000424795 1248 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 AC073900.1-201ENST00000429766 776 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 AC009237.4-201ENST00000441078 238 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 RPLP0P1-201ENST00000457002 361 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 AC026336.1-201ENST00000466577 351 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 AC025271.1-201ENST00000485045 429 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 RPL21P42-201ENST00000488408 464 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 MTCO1P55-201ENST00000489829 745 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 RPL10P7-201ENST00000495649 625 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 OR7E161P-201ENST00000533722 967 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 MIR744-201ENST00000578242 98 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 RN7SL667P-201ENST00000582817 298 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 MIR8082-201ENST00000612488 81 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 AC006453.3-201ENST00000635891 377 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 JAML-213ENST00000640745 951 ntTSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 AL356585.10-201ENST00000641883 123 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.8□□□□□ -1
HMG20BQ9P0W2 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.8□□□□□ -1
HMG20BQ9P0W2 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.8□□□□□ -1
HMG20BQ9P0W2 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.79□□□□□ -1
HMG20BQ9P0W2 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HMG20BQ9P0W2 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
HMG20BQ9P0W2 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
HMG20BQ9P0W2 SNORA70.5-201ENST00000365519 135 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 HCG25-217ENST00000422366 702 ntTSL 3 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 VDAC1P2-201ENST00000423609 850 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 AC009362.1-201ENST00000427253 406 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 MYO5BP3-201ENST00000431872 1279 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 AC104698.1-201ENST00000435671 276 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 MED28P7-201ENST00000456611 530 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 RPL23P10-201ENST00000468780 412 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 LINC01085-203ENST00000511195 326 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 AC092032.1-201ENST00000603090 165 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 AC024085.1-201ENST00000604299 432 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 AC245407.2-201ENST00000614199 451 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 AC116631.1-202ENST00000640984 683 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.79□□□□□ -1
HMG20BQ9P0W2 AL353622.1-201ENST00000604716 1945 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 OR52K3P-202ENST00000641797 1729 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
HMG20BQ9P0W2 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HMG20BQ9P0W2 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.79□□□□□ -1
HMG20BQ9P0W2 AL035563.1-201ENST00000609087 1539 ntBASIC8.79□□□□□ -1
HMG20BQ9P0W2 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.79□□□□□ -1
HMG20BQ9P0W2 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 361.4 ms