Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPS4XP21-201ENST00000603814 750 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC9.12□□□□□ -0.95
COL15A1P39059 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC9.12□□□□□ -0.95
COL15A1P39059 AC073263.3-201ENST00000624449 858 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AC011471.4-201ENST00000638271 216 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 AL356361.1-201ENST00000400943 1459 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC9.11□□□□□ -0.95
COL15A1P39059 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC9.11□□□□□ -0.95
COL15A1P39059 MAPK10-281ENST00000641170 3070 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
COL15A1P39059 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC9.11□□□□□ -0.95
COL15A1P39059 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.11□□□□□ -0.95
COL15A1P39059 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC9.11□□□□□ -0.95
COL15A1P39059 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC9.11□□□□□ -0.95
COL15A1P39059 AC022507.1-201ENST00000548349 1505 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC9.11□□□□□ -0.95
COL15A1P39059 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
COL15A1P39059 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
COL15A1P39059 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 RN7SKP191-201ENST00000364713 306 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC9.11□□□□□ -0.95
COL15A1P39059 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
COL15A1P39059 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
COL15A1P39059 AC245036.1-201ENST00000391727 309 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 EAF2-202ENST00000451944 960 ntTSL 2 BASIC9.11□□□□□ -0.95
COL15A1P39059 AL034369.1-201ENST00000453808 477 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 AL583856.1-201ENST00000454078 1101 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 UOX-201ENST00000471089 899 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 AC040975.1-201ENST00000472104 316 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC9.11□□□□□ -0.95
COL15A1P39059 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 RN7SKP11-201ENST00000517018 287 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC9.11□□□□□ -0.95
COL15A1P39059 ST13P6-201ENST00000522430 1102 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC9.11□□□□□ -0.95
COL15A1P39059 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC9.11□□□□□ -0.95
COL15A1P39059 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC9.11□□□□□ -0.95
COL15A1P39059 AC015801.1-201ENST00000585651 153 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 AL513548.2-201ENST00000602994 1207 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 AC019257.2-201ENST00000605539 497 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
COL15A1P39059 MIR6823-201ENST00000622118 61 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 OR5M2P-202ENST00000641241 4242 ntBASIC9.11□□□□□ -0.95
COL15A1P39059 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
COL15A1P39059 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC9.1□□□□□ -0.95
COL15A1P39059 AC087501.5-201ENST00000607496 2374 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC9.1□□□□□ -0.95
COL15A1P39059 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC9.1□□□□□ -0.95
COL15A1P39059 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 LRRC37A12P-201ENST00000454917 1801 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 TRIM51HP-202ENST00000530412 1823 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC9.1□□□□□ -0.95
COL15A1P39059 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC9.1□□□□□ -0.95
COL15A1P39059 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC9.1□□□□□ -0.95
COL15A1P39059 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC9.1□□□□□ -0.95
COL15A1P39059 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
COL15A1P39059 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
COL15A1P39059 RNA5SP176-201ENST00000390956 110 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 RAB5CP1-201ENST00000395972 580 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC9.1□□□□□ -0.95
COL15A1P39059 ALDH7A1P4-201ENST00000412255 178 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC9.1□□□□□ -0.95
COL15A1P39059 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC9.1□□□□□ -0.95
COL15A1P39059 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC9.1□□□□□ -0.95
COL15A1P39059 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC9.1□□□□□ -0.95
COL15A1P39059 AC099670.1-201ENST00000455141 783 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 RN7SL393P-201ENST00000463588 296 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC9.1□□□□□ -0.95
COL15A1P39059 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms