Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 RN7SKP23-201ENST00000625159 4301 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-DOAP06340 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-DOAP06340 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-DOAP06340 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-DOAP06340 AL049776.1-201ENST00000624600 2025 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-DOAP06340 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 AL035563.1-201ENST00000609087 1539 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 RNA5SP53-201ENST00000391299 120 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-DOAP06340 E2F6P1-201ENST00000428850 745 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 ANKRD54P1-201ENST00000433115 471 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 AL604028.2-201ENST00000437848 788 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 RPL23P10-201ENST00000468780 412 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 AC091982.1-202ENST00000473923 343 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 AC008868.1-201ENST00000509786 737 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 IGHVIII-25-1-201ENST00000522143 241 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 AC068802.1-201ENST00000603420 732 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 AL157762.1-201ENST00000619612 415 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 AC016542.2-201ENST00000624201 619 ntBASIC8.56□□□□□ -1.04
HLA-DOAP06340 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-DOAP06340 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.56□□□□□ -1.04
HLA-DOAP06340 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-DOAP06340 TRIM64EP-201ENST00000531233 1307 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 AL133320.1-201ENST00000621423 2352 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-DOAP06340 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-DOAP06340 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-DOAP06340 MIR152-201ENST00000385212 87 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 EEF1GP6-201ENST00000402309 905 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 VDAC1P10-201ENST00000416715 891 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 GEMIN2P2-201ENST00000418195 715 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 YWHAZP5-201ENST00000419975 730 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 PUDPP2-201ENST00000431423 643 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 RPSAP7-201ENST00000456871 885 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-DOAP06340 AL591122.1-201ENST00000487348 492 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 AL135933.1-201ENST00000498657 802 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 AC253576.1-201ENST00000511645 1156 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 SCARNA11.1-201ENST00000516918 132 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 AC015801.1-201ENST00000585651 153 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 AL353729.2-201ENST00000605859 1249 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 AC103798.2-201ENST00000624292 632 ntBASIC8.55□□□□□ -1.04
HLA-DOAP06340 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-DOAP06340 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-DOAP06340 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-DOAP06340 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-DOAP06340 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-DOAP06340 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
HLA-DOAP06340 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 LINC00663-203ENST00000586885 2546 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC138207.6-201ENST00000579164 1967 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 210.9 ms