Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC7.7□□□□□ -1.18
APOEP02649 AC090680.1-201ENST00000464696 860 ntBASIC7.7□□□□□ -1.18
APOEP02649 RPS14P7-201ENST00000473701 448 ntBASIC7.7□□□□□ -1.18
APOEP02649 AC009153.1-201ENST00000485799 496 ntBASIC7.7□□□□□ -1.18
APOEP02649 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
APOEP02649 AC008040.4-201ENST00000494834 768 ntBASIC7.7□□□□□ -1.18
APOEP02649 SSX8-201ENST00000506270 579 ntBASIC7.7□□□□□ -1.18
APOEP02649 GCSHP1-201ENST00000512554 484 ntBASIC7.7□□□□□ -1.18
APOEP02649 AC068631.3-201ENST00000538831 225 ntBASIC7.7□□□□□ -1.18
APOEP02649 CR382285.1-202ENST00000604687 547 ntBASIC7.7□□□□□ -1.18
APOEP02649 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.7□□□□□ -1.18
APOEP02649 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.7□□□□□ -1.18
APOEP02649 AC241377.2-202ENST00000636462 997 ntBASIC7.7□□□□□ -1.18
APOEP02649 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
APOEP02649 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
APOEP02649 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
APOEP02649 TUBBP10-201ENST00000427668 1301 ntBASIC7.7□□□□□ -1.18
APOEP02649 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.7□□□□□ -1.18
APOEP02649 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
APOEP02649 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
APOEP02649 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
APOEP02649 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
APOEP02649 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
APOEP02649 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.7□□□□□ -1.18
APOEP02649 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.69□□□□□ -1.18
APOEP02649 WNK1-220ENST00000574564 1401 ntBASIC7.69□□□□□ -1.18
APOEP02649 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.69□□□□□ -1.18
APOEP02649 UG0898H09-202ENST00000623646 7040 ntBASIC7.69□□□□□ -1.18
APOEP02649 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
APOEP02649 NF1P8-201ENST00000415351 1461 ntBASIC7.69□□□□□ -1.18
APOEP02649 AC018688.1-201ENST00000636528 1754 ntBASIC7.69□□□□□ -1.18
APOEP02649 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.69□□□□□ -1.18
APOEP02649 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 UGT2B25P-201ENST00000511504 1586 ntBASIC7.69□□□□□ -1.18
APOEP02649 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
APOEP02649 RNU1-38P-201ENST00000362817 144 ntBASIC7.69□□□□□ -1.18
APOEP02649 SNORA68-201ENST00000384437 133 ntBASIC7.69□□□□□ -1.18
APOEP02649 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 LARP1P1-201ENST00000407692 292 ntBASIC7.69□□□□□ -1.18
APOEP02649 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 ELOBP4-201ENST00000423418 296 ntBASIC7.69□□□□□ -1.18
APOEP02649 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.69□□□□□ -1.18
APOEP02649 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.69□□□□□ -1.18
APOEP02649 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 AC019185.3-201ENST00000438805 323 ntBASIC7.69□□□□□ -1.18
APOEP02649 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.69□□□□□ -1.18
APOEP02649 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.69□□□□□ -1.18
APOEP02649 AC092421.1-201ENST00000448148 418 ntBASIC7.69□□□□□ -1.18
APOEP02649 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.69□□□□□ -1.18
APOEP02649 AC114755.1-201ENST00000453101 868 ntBASIC7.69□□□□□ -1.18
APOEP02649 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.69□□□□□ -1.18
APOEP02649 AC018892.2-201ENST00000457656 693 ntBASIC7.69□□□□□ -1.18
APOEP02649 RN7SL791P-201ENST00000467868 295 ntBASIC7.69□□□□□ -1.18
APOEP02649 GLRXP3-201ENST00000470810 321 ntBASIC7.69□□□□□ -1.18
APOEP02649 AC084878.1-201ENST00000480555 648 ntBASIC7.69□□□□□ -1.18
APOEP02649 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 AC090539.2-201ENST00000523425 671 ntBASIC7.69□□□□□ -1.18
APOEP02649 AP005597.2-201ENST00000526238 341 ntBASIC7.69□□□□□ -1.18
APOEP02649 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC7.69□□□□□ -1.18
APOEP02649 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC7.69□□□□□ -1.18
APOEP02649 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
APOEP02649 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
APOEP02649 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.69□□□□□ -1.18
APOEP02649 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.69□□□□□ -1.18
APOEP02649 RN7SL14P-201ENST00000579715 298 ntBASIC7.69□□□□□ -1.18
APOEP02649 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.69□□□□□ -1.18
APOEP02649 AC097381.3-201ENST00000608962 462 ntBASIC7.69□□□□□ -1.18
APOEP02649 BX005040.2-201ENST00000620504 370 ntBASIC7.69□□□□□ -1.18
APOEP02649 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 AP000842.4-201ENST00000638781 748 ntBASIC7.69□□□□□ -1.18
APOEP02649 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
APOEP02649 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.69□□□□□ -1.18
APOEP02649 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
APOEP02649 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 AL391262.1-201ENST00000556558 1992 ntBASIC7.69□□□□□ -1.18
APOEP02649 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
APOEP02649 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 ZNF812P-201ENST00000457674 1694 ntBASIC7.69□□□□□ -1.18
APOEP02649 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 OR2AH1P-202ENST00000641232 2744 ntBASIC7.69□□□□□ -1.18
APOEP02649 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.69□□□□□ -1.18
APOEP02649 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
APOEP02649 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
APOEP02649 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.69□□□□□ -1.18
APOEP02649 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
APOEP02649 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
APOEP02649 DDX10P2-201ENST00000417796 2614 ntBASIC7.68□□□□□ -1.18
APOEP02649 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms