Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SCN2BO60939 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SCN2BO60939 AC132219.2-201ENST00000624416 2327 ntBASIC6.9□□□□□ -1.31
SCN2BO60939 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SCN2BO60939 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SCN2BO60939 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.9□□□□□ -1.31
SCN2BO60939 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SCN2BO60939 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SCN2BO60939 AC090771.1-201ENST00000585803 1618 ntBASIC6.9□□□□□ -1.31
SCN2BO60939 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.9□□□□□ -1.31
SCN2BO60939 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SCN2BO60939 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.9□□□□□ -1.31
SCN2BO60939 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
SCN2BO60939 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SCN2BO60939 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SCN2BO60939 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SCN2BO60939 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SCN2BO60939 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN2BO60939 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN2BO60939 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.89□□□□□ -1.31
SCN2BO60939 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SCN2BO60939 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN2BO60939 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 RPSAP59-201ENST00000421048 890 ntBASIC6.89□□□□□ -1.31
SCN2BO60939 FDPSP1-201ENST00000424976 1071 ntBASIC6.89□□□□□ -1.31
SCN2BO60939 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN2BO60939 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC6.89□□□□□ -1.31
SCN2BO60939 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN2BO60939 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC6.89□□□□□ -1.31
SCN2BO60939 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC6.89□□□□□ -1.31
SCN2BO60939 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.89□□□□□ -1.31
SCN2BO60939 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.89□□□□□ -1.31
SCN2BO60939 MIR5192-201ENST00000579892 92 ntBASIC6.89□□□□□ -1.31
SCN2BO60939 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.89□□□□□ -1.31
SCN2BO60939 AC015801.1-201ENST00000585651 153 ntBASIC6.89□□□□□ -1.31
SCN2BO60939 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.89□□□□□ -1.31
SCN2BO60939 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC6.89□□□□□ -1.31
SCN2BO60939 AC097381.3-201ENST00000608962 462 ntBASIC6.89□□□□□ -1.31
SCN2BO60939 AC006335.3-201ENST00000613408 292 ntBASIC6.89□□□□□ -1.31
SCN2BO60939 AC143336.1-201ENST00000614164 836 ntBASIC6.89□□□□□ -1.31
SCN2BO60939 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 AL132796.3-201ENST00000624703 900 ntBASIC6.89□□□□□ -1.31
SCN2BO60939 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.89□□□□□ -1.31
SCN2BO60939 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.89□□□□□ -1.31
SCN2BO60939 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.89□□□□□ -1.31
SCN2BO60939 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 DDX50P1-201ENST00000438163 2400 ntBASIC6.89□□□□□ -1.31
SCN2BO60939 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
SCN2BO60939 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.89□□□□□ -1.31
SCN2BO60939 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SCN2BO60939 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCN2BO60939 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCN2BO60939 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SCN2BO60939 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCN2BO60939 DDX10P2-201ENST00000417796 2614 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AC133552.3-201ENST00000572236 1869 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.88□□□□□ -1.31
SCN2BO60939 ENO1P4-201ENST00000416471 1785 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AC079178.2-201ENST00000439323 1624 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SCN2BO60939 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN2BO60939 AC068733.2-201ENST00000605434 1418 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN2BO60939 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.88□□□□□ -1.31
SCN2BO60939 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN2BO60939 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 MIR181C-201ENST00000384881 110 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 PTMAP8-201ENST00000397729 342 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 AC113608.1-201ENST00000398740 305 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 OR4F7P-201ENST00000402444 931 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 OR4F1P-201ENST00000405102 938 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 RN7SKP232-201ENST00000410170 290 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 RN7SKP89-201ENST00000410774 242 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 OR4F2P-201ENST00000424047 938 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.88□□□□□ -1.31
SCN2BO60939 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN2BO60939 RBMY3AP-201ENST00000449381 1145 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms