Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC087289.5-201ENST00000586076 3175 ntBASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 CNN2P6-201ENST00000439038 900 ntBASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 AC137761.2-201ENST00000561729 223 ntBASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 AC145350.3-201ENST00000569033 163 ntBASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA3Q9Y5H8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 DUX4L16-201ENST00000555130 1264 ntBASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 AC068338.2-201ENST00000563278 1430 ntBASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 AC009237.14-201ENST00000609975 1594 ntBASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHA3Q9Y5H8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 KRT18P5-201ENST00000436075 1291 ntBASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA3Q9Y5H8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHA3Q9Y5H8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
PCDHA3Q9Y5H8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
PCDHA3Q9Y5H8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHA3Q9Y5H8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
PCDHA3Q9Y5H8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA3Q9Y5H8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHA3Q9Y5H8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHA3Q9Y5H8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA3Q9Y5H8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHA3Q9Y5H8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
PCDHA3Q9Y5H8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHA3Q9Y5H8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA3Q9Y5H8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA3Q9Y5H8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 KRT18P68-201ENST00000392293 1000 ntBASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 AL031963.3-201ENST00000606441 850 ntBASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 AC105020.6-201ENST00000621523 1217 ntBASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDHA3Q9Y5H8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms